RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 A0A087WZ62 844 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 E9PMD0 336 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 ENPP3O14638 875 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
USE1-206ENST00000595101 RPS6KA5O75582 802 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 PAK2Q13177 524 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 ARL6IP4Q66PJ3 421 aaKnown RBP17.14■□□□□ 0.33
USE1-206ENST00000595101 NLRP7Q8WX94 980 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 NLRP4Q96MN2 994 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 NACC1Q96RE7 527 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
USE1-206ENST00000595101 NKX2-4Q9H2Z4 354 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
USE1-206ENST00000595101 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
USE1-206ENST00000595101 TFIP11Q9UBB9 837 aaKnown RBP17.14■□□□□ 0.33
USE1-206ENST00000595101 LCHNA4D1U4 455 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 UPP2O95045 317 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
USE1-206ENST00000595101 RFC5P40937 340 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 DNM2P50570 870 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 APBB2Q92870 758 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 SCLT1Q96NL6 688 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 CLIC6Q96NY7 704 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 SLC9A7Q96T83 725 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 ZDHHC9Q9Y397 364 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
USE1-206ENST00000595101 SRGAP2CP0DJJ0 459 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 DARSP14868 501 aaKnown RBP17.12■□□□□ 0.33
USE1-206ENST00000595101 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
USE1-206ENST00000595101 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 TIFAQ96CG3 184 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 PNMA5Q96PV4 448 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 MTRQ99707 1265 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 BHMT2Q9H2M3 363 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 F13A1P00488 732 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 CA3P07451 260 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
USE1-206ENST00000595101 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
USE1-206ENST00000595101 LAMTOR4Q0VGL1 99 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 GRB10Q13322 594 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 ATP6V0A4Q9HBG4 840 aa17.12■□□□□ 0.33
USE1-206ENST00000595101 DBR1Q9UK59 544 aaKnown RBP17.12■□□□□ 0.33
USE1-206ENST00000595101 DGAT1O75907 488 aa17.11■□□□□ 0.33
USE1-206ENST00000595101 GJB5O95377 273 aa17.11■□□□□ 0.33
USE1-206ENST00000595101 PSPC1Q8WXF1 523 aaKnown RBP17.11■□□□□ 0.33
USE1-206ENST00000595101 TOP1MTQ969P6 601 aa17.11■□□□□ 0.33
USE1-206ENST00000595101 CCDC43Q96MW1 224 aaKnown RBP17.11■□□□□ 0.33
USE1-206ENST00000595101 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
USE1-206ENST00000595101 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
USE1-206ENST00000595101 SEMA6BQ9H3T3 888 aa17.11■□□□□ 0.33
USE1-206ENST00000595101 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
USE1-206ENST00000595101 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
USE1-206ENST00000595101 PTPRSQ13332 1948 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 TLL1O43897 1013 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 EFCAB14O75071 495 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 AMHP03971 560 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 ARL2P36404 184 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 PADI6Q6TGC4 694 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 EPSTI1Q96J88 318 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 ZBED2Q9BTP6 218 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 MSRAQ9UJ68 235 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 ARHGEF35A5YM69 484 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 GPR182O15218 404 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 BMP15O95972 392 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 GLRA2P23416 452 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 GRIN2CQ14957 1233 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 GPR153Q6NV75 609 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 CABP7Q86V35 215 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 CRIPAKQ8N1N5 446 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 ADAM2Q99965 735 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 POLR3FQ9H1D9 316 aaPredicted RBP17.1■□□□□ 0.33
USE1-206ENST00000595101 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
USE1-206ENST00000595101 ZNF576Q9H609 170 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
USE1-206ENST00000595101 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 MUTP22033 750 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 KARSQ15046 597 aaKnown RBP17.09■□□□□ 0.33
USE1-206ENST00000595101 HYIQ5T013 277 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 ZNF697Q5TEC3 545 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 LINC00301Q8NCQ3 95 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 RUSC1Q9BVN2 902 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 GCOM2Q9BZD3 368 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms