RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 LENG1Q96BZ8 264 aaPredicted RBP16.73■□□□□ 0.27
VRK3-207ENST00000594092 CTAGE1Q96RT6 745 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 LIMA1Q9UHB6 759 aaKnown RBP16.73■□□□□ 0.27
VRK3-207ENST00000594092 NRBP1Q9UHY1 535 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 FAM184BQ9ULE4 1060 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 ZKSCAN5Q9Y2L8 839 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 GPR25O00155 361 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 ZNF286BP0CG31 522 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 RTP1P59025 263 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 KRT31Q15323 416 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 MFSD14CQ5VZR4 134 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 TLK2Q86UE8 772 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 KSR1Q8IVT5 923 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 ANKRD20A12PQ8NF67 263 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 C16orf70Q9BSU1 422 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
VRK3-207ENST00000594092 RNPEPQ9H4A4 650 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 ST6GALNAC4Q9H4F1 302 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 C17orf75Q9HAS0 396 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 IMPACTQ9P2X3 320 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 TRAF3IP3Q9Y228 551 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.73■□□□□ 0.275e-6■■■■□ 19.3
VRK3-207ENST00000594092 ZMYM2Q9UBW7 1377 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 LRRC10BA6NIK2 292 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 A6NJR5 290 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 PDXKO00764 312 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 SLC16A4O15374 487 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 HBP1O60381 514 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 MAFO75444 373 aaPredicted RBP16.72■□□□□ 0.27
VRK3-207ENST00000594092 EEF1GP26641 437 aaKnown RBP16.72■□□□□ 0.27
VRK3-207ENST00000594092 NPTX2P47972 431 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 NCKAP1LP55160 1127 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 DMP1Q13316 513 aaPredicted RBP16.72■□□□□ 0.27
VRK3-207ENST00000594092 ALCAMQ13740 583 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 DGKDQ16760 1214 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 TMEM143Q96AN5 459 aa16.72■□□□□ 0.27
VRK3-207ENST00000594092 TYW1Q9NV66 732 aaKnown RBP16.72■□□□□ 0.27
VRK3-207ENST00000594092 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 A0A1B0GTH6 734 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
VRK3-207ENST00000594092 CYBAP13498 195 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 GTF2BQ00403 316 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 FKBP3Q00688 224 aaKnown RBP16.71■□□□□ 0.27
VRK3-207ENST00000594092 TBC1D8BQ0IIM8 1120 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 TMC6Q7Z403 805 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 HAUS6Q7Z4H7 955 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 FILIP1Q7Z7B0 1213 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 ZC3H3Q8IXZ2 948 aaKnown RBP16.71■□□□□ 0.27
VRK3-207ENST00000594092 SLC17A8Q8NDX2 589 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 CNOT6LQ96LI5 555 aaKnown RBP16.71■□□□□ 0.27
VRK3-207ENST00000594092 NTPCRQ9BSD7 190 aaKnown RBP16.71■□□□□ 0.27
VRK3-207ENST00000594092 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
VRK3-207ENST00000594092 SRRDQ9UH36 339 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 Q9Y3F1 56 aa16.71■□□□□ 0.27
VRK3-207ENST00000594092 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 H3BRB1 525 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 TGFB1I1O43294 461 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 AKR1A1P14550 325 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 ARL2P36404 184 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 SMTNP53814 917 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 TMEM161BQ8NDZ6 487 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 TRAPPC12Q8WVT3 735 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 IFT74Q96LB3 600 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 ZNF830Q96NB3 372 aaPredicted RBP16.7■□□□□ 0.26
VRK3-207ENST00000594092 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 TUT1Q9H6E5 874 aaKnown RBP16.7■□□□□ 0.26
VRK3-207ENST00000594092 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 TAB2Q9NYJ8 693 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
VRK3-207ENST00000594092 IGKV6-21A0A0C4DH24 114 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 CALUO43852 315 aaPredicted RBP16.7■□□□□ 0.26
VRK3-207ENST00000594092 HOXD10P28358 340 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 COPB1P53618 953 aaKnown RBP16.7■□□□□ 0.26
VRK3-207ENST00000594092 GSDMDP57764 484 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 TRIM32Q13049 653 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 NR1I3Q14994 352 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 CEP63Q96MT8 703 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
VRK3-207ENST00000594092 INSRRP14616 1297 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 GLRA2P23416 452 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
VRK3-207ENST00000594092 ADAM9Q13443 819 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 VSTM4Q8IW00 320 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 EXOC8Q8IYI6 725 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 ACCSQ96QU6 501 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 AP5M1Q9H0R1 490 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 GBP3Q9H0R5 595 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 VPS16Q9H269 839 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms