RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 LRRC41Q15345 812 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 ODR4Q5SWX8 454 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 FAM102BQ5T8I3 360 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 CENPPQ6IPU0 288 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 TTI2Q6NXR4 508 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 MAEAQ7L5Y9 396 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 FAM178BQ8IXR5 827 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 EXOC8Q8IYI6 725 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 RAET1EQ8TD07 263 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 SCFD1Q8WVM8 642 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 SLC7A3Q8WY07 619 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 STRA6Q9BX79 667 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 AP5M1Q9H0R1 490 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 RNPEPQ9H4A4 650 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 ST6GALNAC4Q9H4F1 302 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 MRPL44Q9H9J2 332 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 C17orf75Q9HAS0 396 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 GPRC5CQ9NQ84 441 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
CACNA1A-213ENST00000593267 IGKV6-21A0A0C4DH24 114 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 TRIM49BA6NDI0 452 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 H3BRB1 525 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 AP5Z1O43299 807 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 GCNT3O95395 438 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 MYBP10242 640 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZNF18P17022 549 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 NMT1P30419 496 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 NCKAP1LP55160 1127 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ALCAMQ13740 583 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZCWPW2Q504Y3 356 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZNF484Q5JVG2 852 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 SARM1Q6SZW1 724 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZNF720Q7Z2F6 126 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 SLAIN1Q8ND83 568 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 SLC17A8Q8NDX2 589 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZNF507Q8TCN5 953 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZNF333Q96JL9 665 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 KCTD10Q9H3F6 313 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 TUT1Q9H6E5 874 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 FANCLQ9NW38 375 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 TRPC6Q9Y210 931 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 PTCH2Q9Y6C5 1203 aa12.73□□□□□ -0.37
CACNA1A-213ENST00000593267 ZMYM2Q9UBW7 1377 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 HAS3O00219 553 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 MYCP01106 439 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 INSRRP14616 1297 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 HOXD13P35453 343 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 ARL2P36404 184 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 TBC1D8BQ0IIM8 1120 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 DMP1Q13316 513 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 FSCN1Q16658 493 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 ANKRD40Q6AI12 368 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 KAT2BQ92831 832 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 KCNN1Q92952 543 aa12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 DUSP9Q99956 384 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 NTPCRQ9BSD7 190 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-213ENST00000593267 K7ENM7 598 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 KPNA6O60684 536 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 PRPF6O94906 941 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 C22orf31O95567 290 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 RARBP10826 455 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 CNGA1P29973 690 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 NPTX2P47972 431 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 PEX3P56589 373 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 GTF2BQ00403 316 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 BEX3Q00994 111 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 NELFCDQ8IXH7 590 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 ZC3H3Q8IXZ2 948 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 LINC01465Q8N7H1 131 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 NOC3LQ8WTT2 800 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 HVCN1Q96D96 273 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 THAP9Q9H5L6 903 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 SAMSN1Q9NSI8 373 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
CACNA1A-213ENST00000593267 SCN10AQ9Y5Y9 1956 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 MYADML2A6NDP7 307 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 PDXKO00764 312 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 INHAP05111 366 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 MYL3P08590 195 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 C6orf222P0C671 652 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 ATP1A3P13637 1013 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 SCP2P22307 547 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 GLRA2P23416 452 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 GRK4P32298 578 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms