RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	LRRC15	Q8TF66	581 aa		18.19	■□□□□ 0.5
TMC6-223	ENST00000592594	SEMA6B	Q9H3T3	888 aa		18.19	■□□□□ 0.5
TMC6-223	ENST00000592594	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.19	■□□□□ 0.5
TMC6-223	ENST00000592594	LRWD1	Q9UFC0	647 aa		18.19	■□□□□ 0.5
TMC6-223	ENST00000592594	ST3GAL5	Q9UNP4	418 aa		18.19	■□□□□ 0.5
TMC6-223	ENST00000592594	PPME1	Q9Y570	386 aa		18.19	■□□□□ 0.5
TMC6-223	ENST00000592594	PRUNE2	Q8WUY3	3088 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	ENPP3	O14638	875 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	CSDE1	O75534	798 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	CA3	P07451	260 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	DARS	P14868	501 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	FGFR4	P22455	802 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	TMOD1	P28289	359 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	POLG	P54098	1239 aa	Predicted RBP	18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	DSC3	Q14574	896 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	RAB30	Q15771	203 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	ZNF697	Q5TEC3	545 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	OTUD6A	Q7L8S5	288 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	MYOCD	Q8IZQ8	938 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	SPRYD3	Q8NCJ5	442 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	RC3H2	Q9HBD1	1191 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	IFT122	Q9HBG6	1241 aa		18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	DBR1	Q9UK59	544 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-223	ENST00000592594	TMEM265	A0A087WTH1	108 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594		A0A087WZ62	844 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	VWA3A	A6NCI4	1184 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	RPS6KA5	O75582	802 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	CCT6A	P40227	531 aa	Known RBP	18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	HTRA4	P83105	476 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	GRIN2C	Q14957	1233 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	FAM117B	Q6P1L5	589 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	DTHD1	Q6ZMT9	781 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	RHPN2	Q8IUC4	686 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	ASAP3	Q8TDY4	903 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	SNX29	Q8TEQ0	813 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	SLC7A3	Q8WY07	619 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	TOP1MT	Q969P6	601 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	PNMA5	Q96PV4	448 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	USP28	Q96RU2	1077 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	FDXACB1	Q9BRP7	624 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	ZNF576	Q9H609	170 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	PLXNA4	Q9HCM2	1894 aa		18.17	■□□□□ 0.5
TMC6-223	ENST00000592594	EPOP	A6NHQ4	379 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	USO1	O60763	962 aa	Known RBP	18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	AMH	P03971	560 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	XRCC6	P12956	609 aa	Known RBP eCLIP	18.16	■□□□□ 0.5	9e-8	■■□□□ 11.5
TMC6-223	ENST00000592594	EIF4B	P23588	611 aa	Known RBP	18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	ARL2	P36404	184 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	TAP1	Q03518	808 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	NFX1	Q12986	1120 aa	Known RBP	18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	HAUS3	Q68CZ6	603 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	ERMN	Q8TAM6	284 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	PRPF31	Q8WWY3	499 aa	Known RBP	18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	MTR	Q99707	1265 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	MINDY3	Q9H8M7	445 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	GPRC5C	Q9NQ84	441 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	DDX19A	Q9NUU7	478 aa	Known RBP	18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	MSRA	Q9UJ68	235 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	COL4A3BP	Q9Y5P4	624 aa		18.16	■□□□□ 0.5
TMC6-223	ENST00000592594	TLL1	O43897	1013 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	LINC00271	P0C7V0	271 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	MUT	P22033	750 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	LAMTOR4	Q0VGL1	99 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	GRB10	Q13322	594 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	HYI	Q5T013	277 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	ZNF410	Q86VK4	478 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	SP7	Q8TDD2	431 aa	Predicted RBP	18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	NLRP7	Q8WX94	980 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	BSND	Q8WZ55	320 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	NLRP4	Q96MN2	994 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	NACC1	Q96RE7	527 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	JPH2	Q9BR39	696 aa	Predicted RBP	18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	ATP6V0A4	Q9HBG4	840 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	FBXO2	Q9UK22	296 aa	Predicted RBP	18.15	■□□□□ 0.5
TMC6-223	ENST00000592594	KIAA1024	Q9UPX6	916 aa		18.15	■□□□□ 0.5
TMC6-223	ENST00000592594		C9IYK1	514 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594		E9PMD0	336 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	GAS2	O43903	313 aa	Known RBP	18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	DGAT1	O75907	488 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	UPP2	O95045	317 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	GLRA2	P23416	452 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	GATM	P50440	423 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	CAPS	Q13938	189 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	TMEM119	Q4V9L6	283 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	PSPC1	Q8WXF1	523 aa	Known RBP	18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	CDX2	Q99626	313 aa	Predicted RBP	18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	FTHL17	Q9BXU8	183 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	ZDHHC9	Q9Y397	364 aa		18.14	■□□□□ 0.49
TMC6-223	ENST00000592594	GPR182	O15218	404 aa		18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	DNM2	P50570	870 aa		18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	PPP2R2D	Q66LE6	453 aa		18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	PADI6	Q6TGC4	694 aa		18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	USP49	Q70CQ1	688 aa		18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	ZNF710	Q8N1W2	664 aa		18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	ZNF689	Q96CS4	500 aa	Predicted RBP	18.13	■□□□□ 0.49
TMC6-223	ENST00000592594	RAD9A	Q99638	391 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms