RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PTPROQ16827 1216 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 ZNF579Q8NAF0 562 aaKnown RBP15.56■□□□□ 0.08
APOC1-208ENST00000592535 NLRP7Q8WX94 980 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 HLA-CQ95604 372 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 DYDC2Q96IM9 177 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 C8orf76Q96K31 380 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 LXNQ9BS40 222 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 CYP26B1Q9NR63 512 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 SH2B1Q9NRF2 756 aaPredicted RBP15.56■□□□□ 0.08
APOC1-208ENST00000592535 RGL1Q9NZL6 768 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 COG5Q9UP83 839 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 PCDHB7Q9Y5E2 793 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 PLXNA4Q9HCM2 1894 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 MYO7AQ13402 2215 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 NEMFO60524 1076 aa15.55■□□□□ 0.08
APOC1-208ENST00000592535 CSDE1O75534 798 aaKnown RBP15.55■□□□□ 0.08
APOC1-208ENST00000592535 FGFR4P22455 802 aa15.55■□□□□ 0.08
APOC1-208ENST00000592535 CYP4A11Q02928 519 aa15.55■□□□□ 0.08
APOC1-208ENST00000592535 CTTNQ14247 550 aaKnown RBP15.55■□□□□ 0.08
APOC1-208ENST00000592535 SAFBQ15424 915 aaKnown RBP eCLIP15.55■□□□□ 0.08
APOC1-208ENST00000592535 C4orf19Q8IY42 314 aa15.55■□□□□ 0.08
APOC1-208ENST00000592535 C11orf84Q9BUA3 381 aaPredicted RBP15.55■□□□□ 0.08
APOC1-208ENST00000592535 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
APOC1-208ENST00000592535 A0A087WZ62 844 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 GRM6O15303 877 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 ATP2B1P20020 1258 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 TXKP42681 527 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 DNM2P50570 870 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 FAM189BP81408 668 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
APOC1-208ENST00000592535 AAK1Q2M2I8 961 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 TIGD5Q53EQ6 642 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 FAM102BQ5T8I3 360 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 RHPN2Q8IUC4 686 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 IL27Q8NEV9 243 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 ADAMTS19Q8TE59 1207 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 CEP170P1Q96L14 293 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 FDXACB1Q9BRP7 624 aaPredicted RBP15.54■□□□□ 0.08
APOC1-208ENST00000592535 GCOM2Q9BZD3 368 aaPredicted RBP15.54■□□□□ 0.08
APOC1-208ENST00000592535 TMEM60Q9H2L4 133 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 TTC12Q9H892 705 aaPredicted RBP15.54■□□□□ 0.08
APOC1-208ENST00000592535 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
APOC1-208ENST00000592535 TMEM161AQ9NX61 479 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 PCDHA12Q9UN75 941 aa15.54■□□□□ 0.08
APOC1-208ENST00000592535 TBKBP1A7MCY6 615 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 ZBTB39O15060 712 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 FGFR1P11362 822 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 BMP1P13497 986 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 ZSCAN20P17040 1043 aaPredicted RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 YWHABP31946 246 aaKnown RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 RABEP1Q15276 862 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 KSR1Q8IVT5 923 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 TPH2Q8IWU9 490 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 FAM184AQ8NB25 1140 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 MTMR9Q96QG7 549 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 JPH2Q9BR39 696 aaPredicted RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 PLVAPQ9BX97 442 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 LMAN2LQ9H0V9 348 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 ELAC1Q9H777 363 aaKnown RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 ZSWIM4Q9H7M6 989 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 ATP6V0A4Q9HBG4 840 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 ALG13Q9NP73 1137 aaKnown RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
APOC1-208ENST00000592535 HCSTQ9UBK5 93 aa15.53■□□□□ 0.08
APOC1-208ENST00000592535 SLITRK3O94933 977 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 CSPG5O95196 566 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 MCM7P33993 719 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 POLGP54098 1239 aaPredicted RBP15.52■□□□□ 0.08
APOC1-208ENST00000592535 CDC42EP1Q00587 391 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 XKR9Q5GH70 373 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 OTUD6AQ7L8S5 288 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 ZNF410Q86VK4 478 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 ECHDC2Q86YB7 292 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 FBXO18Q8NFZ0 1043 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 SLC7A3Q8WY07 619 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 P2RX5Q93086 422 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 NLRP4Q96MN2 994 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 FOXP1Q9H334 677 aaPredicted RBP15.52■□□□□ 0.08
APOC1-208ENST00000592535 NSUN3Q9H649 340 aaKnown RBP15.52■□□□□ 0.08
APOC1-208ENST00000592535 DHX33Q9H6R0 707 aaKnown RBP15.52■□□□□ 0.08
APOC1-208ENST00000592535 UBE2ZQ9H832 354 aaPredicted RBP15.52■□□□□ 0.08
APOC1-208ENST00000592535 RNF19AQ9NV58 838 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 PPME1Q9Y570 386 aa15.52■□□□□ 0.08
APOC1-208ENST00000592535 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.51■□□□□ 0.07
APOC1-208ENST00000592535 POTEMA6NI47 508 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 ITGB1P05556 798 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 RFC5P40937 340 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 CAMK1Q14012 370 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 EMC2Q15006 297 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 SPOUT1Q5T280 376 aaKnown RBP15.51■□□□□ 0.07
APOC1-208ENST00000592535 KLHL23Q8NBE8 558 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 TMEM143Q96AN5 459 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 NECAB3Q96P71 396 aaPredicted RBP15.51■□□□□ 0.07
APOC1-208ENST00000592535 UHRF1Q96T88 793 aaPredicted RBP15.51■□□□□ 0.07
APOC1-208ENST00000592535 HSD17B14Q9BPX1 270 aa15.51■□□□□ 0.07
APOC1-208ENST00000592535 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 241.9 ms