RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 GAB3Q8WWW8 586 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 SMG7Q92540 1137 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 HEBP1Q9NRV9 189 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 TCP11L1Q9NUJ3 509 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 IL17BQ9UHF5 180 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 TNNQ9UQP3 1299 aa10.37□□□□□ -0.75
SMARCA4-218ENST00000592158 ZFHX3Q15911 3703 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 DOCK6Q96HP0 2047 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 C2CD2LO14523 706 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 INPPL1O15357 1258 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 RPP40O75818 363 aaKnown RBP10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 CAVIN2O95810 425 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 CTSAP10619 480 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 FGFR1P11362 822 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 HOXC13P31276 330 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 CLCN4P51793 760 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 MTX1Q13505 466 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 CCDC158Q5M9N0 1113 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 RSPH3Q86UC2 560 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 GMCL1P1Q8NEA9 526 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 SPATA33Q96N06 139 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 RHOBTB2Q9BYZ6 727 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 PRR12Q9ULL5 1215 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 NUP205Q92621 2012 aa10.36□□□□□ -0.75
SMARCA4-218ENST00000592158 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 PAPSS2O95340 614 aaPredicted RBP10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 GNAI2P04899 355 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 KLRC2P26717 231 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 ITPKBP27987 946 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 CREB5Q02930 508 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 PAK2Q13177 524 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 MYSM1Q5VVJ2 828 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 TAF2Q6P1X5 1199 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 SPEM1Q8N4L4 309 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 CLEC4DQ8WXI8 215 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 ARHGAP45Q92619 1136 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 MKL1Q969V6 931 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 CLUAP1Q96AJ1 413 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 MAN1C1Q9NR34 630 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 DNMT3LQ9UJW3 386 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 ZFP37Q9Y6Q3 630 aaPredicted RBP10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 ZMYM2Q9UBW7 1377 aa10.35□□□□□ -0.75
SMARCA4-218ENST00000592158 ATG2BQ96BY7 2078 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 ITPR2Q14571 2701 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 PNMA6EA0A0J9YXQ4 647 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 TEX51A0A1B0GUA7 166 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 NT5C1B-RDH14C9J2C7 533 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 LGALS2P05162 132 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 TRIM27P14373 513 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 METAP2P50579 478 aaKnown RBP eCLIP10.34□□□□□ -0.757e-9■■□□□ 14
SMARCA4-218ENST00000592158 FAM193AP78312 1265 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 CYP4F3Q08477 520 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 G3BP1Q13283 466 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 MTSS1LQ765P7 747 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 DNAJB3Q8WWF6 145 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 PHKBQ93100 1093 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 TMEM169Q96HH4 297 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 ZC3H10Q96K80 434 aaKnown RBP10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 ADAMTS10Q9H324 1103 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 PIDD1Q9HB75 910 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 DNHD1Q96M86 4753 aa10.34□□□□□ -0.75
SMARCA4-218ENST00000592158 SALL3Q9BXA9 1300 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 MAN2B1O00754 1011 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 KHNYNO15037 678 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 MGEA5O60502 916 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 PLA2G6O60733 806 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 RFPL2O75678 378 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 BCAR3O75815 825 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 MYBP10242 640 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 SLC1A4P43007 532 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 SERINC3Q13530 473 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 STXBP2Q15833 593 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 PIP4P1Q86T03 277 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 AMOTL1Q8IY63 956 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 CASD1Q96PB1 797 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 PHF20Q9BVI0 1012 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 SEMA4CQ9C0C4 833 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 TMEM117Q9H0C3 514 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 SQORQ9Y6N5 450 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 PTPRBP23467 1997 aa10.33□□□□□ -0.76
SMARCA4-218ENST00000592158 CACNA1DQ01668 2161 aa10.32□□□□□ -0.76
SMARCA4-218ENST00000592158 EML5Q05BV3 1969 aa10.32□□□□□ -0.76
SMARCA4-218ENST00000592158 GOLGA4Q13439 2230 aaKnown RBP10.32□□□□□ -0.76
SMARCA4-218ENST00000592158 GGPS1O95749 300 aa10.32□□□□□ -0.76
SMARCA4-218ENST00000592158 RASA1P20936 1047 aa10.32□□□□□ -0.76
SMARCA4-218ENST00000592158 HOXA6P31267 233 aa10.32□□□□□ -0.76
SMARCA4-218ENST00000592158 POLGP54098 1239 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms