RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 ADAM2Q99965 735 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 C17orf80Q9BSJ5 609 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 RGS18Q9NS28 235 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 BMP2KQ9NSY1 1161 aaPredicted RBP24.98■■□□□ 1.59
MBD3-208ENST00000590830 MTUS1Q9ULD2 1270 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 PPME1Q9Y570 386 aa24.98■■□□□ 1.59
MBD3-208ENST00000590830 TTC3P53804 2025 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 A0A087WZ62 844 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 LPXNO60711 386 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 DGKIO75912 1065 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 IL17AQ16552 155 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 RHPN2Q8IUC4 686 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 PIGOQ8TEQ8 1089 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 NLRP7Q8WX94 980 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 JPH2Q9BR39 696 aaPredicted RBP24.97■■□□□ 1.59
MBD3-208ENST00000590830 FDXACB1Q9BRP7 624 aaPredicted RBP24.97■■□□□ 1.59
MBD3-208ENST00000590830 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.97■■□□□ 1.59
MBD3-208ENST00000590830 ANKEF1Q9NU02 776 aa24.97■■□□□ 1.59
MBD3-208ENST00000590830 RFC5P40937 340 aa24.96■■□□□ 1.59
MBD3-208ENST00000590830 FXR2P51116 673 aaKnown RBP eCLIP24.96■■□□□ 1.59
MBD3-208ENST00000590830 POLGP54098 1239 aaPredicted RBP24.96■■□□□ 1.59
MBD3-208ENST00000590830 FAM189BP81408 668 aa24.96■■□□□ 1.59
MBD3-208ENST00000590830 GRB10Q13322 594 aa24.96■■□□□ 1.59
MBD3-208ENST00000590830 ODR4Q5SWX8 454 aa24.96■■□□□ 1.59
MBD3-208ENST00000590830 PRPF31Q8WWY3 499 aaKnown RBP24.96■■□□□ 1.59
MBD3-208ENST00000590830 SLC7A3Q8WY07 619 aa24.96■■□□□ 1.59
MBD3-208ENST00000590830 POLR3CQ9BUI4 534 aaPredicted RBP24.96■■□□□ 1.59
MBD3-208ENST00000590830 XPNPEP1Q9NQW7 623 aa24.96■■□□□ 1.59
MBD3-208ENST00000590830 C9IYK1 514 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 LINC00271P0C7V0 271 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 POU3F3P20264 500 aaPredicted RBP24.95■■□□□ 1.58
MBD3-208ENST00000590830 SARSP49591 514 aaKnown RBP24.95■■□□□ 1.58
MBD3-208ENST00000590830 CDC42EP1Q00587 391 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 EMC2Q15006 297 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 FAM43BQ6ZT52 329 aaPredicted RBP24.95■■□□□ 1.58
MBD3-208ENST00000590830 NPAS4Q8IUM7 802 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 TUFT1Q9NNX1 390 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 MTCH2Q9Y6C9 303 aa24.95■■□□□ 1.58
MBD3-208ENST00000590830 TRANK1O15050 2925 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 DENND3A2RUS2 1198 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 XRCC6P12956 609 aaKnown RBP eCLIP24.94■■□□□ 1.58
MBD3-208ENST00000590830 RARRES1P49788 294 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 GATMP50440 423 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 ECM1Q16610 540 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 SLC24A5Q71RS6 500 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 SCLT1Q96NL6 688 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 GCOM2Q9BZD3 368 aaPredicted RBP24.94■■□□□ 1.58
MBD3-208ENST00000590830 IFT122Q9HBG6 1241 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 COL4A6Q14031 1691 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 PRUNE2Q8WUY3 3088 aa24.94■■□□□ 1.58
MBD3-208ENST00000590830 IBSPP21815 317 aaPredicted RBP24.93■■□□□ 1.58
MBD3-208ENST00000590830 RPA1P27694 616 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 LAMTOR4Q0VGL1 99 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 PDIA5Q14554 519 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 RILPL1Q5EBL4 403 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 ZNF410Q86VK4 478 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 EXOC8Q8IYI6 725 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 GDPD5Q8WTR4 605 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 NLRP4Q96MN2 994 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 C1orf112Q9NSG2 853 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 COL4A3BPQ9Y5P4 624 aa24.93■■□□□ 1.58
MBD3-208ENST00000590830 CCDC85BQ15834 202 aaPredicted RBP24.92■■□□□ 1.58
MBD3-208ENST00000590830 EPC2Q52LR7 807 aa24.92■■□□□ 1.58
MBD3-208ENST00000590830 POTEGQ6S5H5 508 aa24.92■■□□□ 1.58
MBD3-208ENST00000590830 FIBCD1Q8N539 461 aa24.92■■□□□ 1.58
MBD3-208ENST00000590830 IGSF22Q8N9C0 903 aa24.92■■□□□ 1.58
MBD3-208ENST00000590830 PSPC1Q8WXF1 523 aaKnown RBP24.92■■□□□ 1.58
MBD3-208ENST00000590830 PPM1EQ8WY54 764 aa24.92■■□□□ 1.58
MBD3-208ENST00000590830 LRWD1Q9UFC0 647 aa24.92■■□□□ 1.58
MBD3-208ENST00000590830 ADGRA3Q8IWK6 1321 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 K7ELQ4 463 aaPredicted RBP24.91■■□□□ 1.58
MBD3-208ENST00000590830 STAG3L1P0CL83 205 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 SRGAP2CP0DJJ0 459 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 FAM102BQ5T8I3 360 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 FERMT3Q86UX7 667 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 TMEM192Q8IY95 271 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 SLC17A8Q8NDX2 589 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 MTRQ99707 1265 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 MINDY3Q9H8M7 445 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 PCDHB7Q9Y5E2 793 aa24.91■■□□□ 1.58
MBD3-208ENST00000590830 GAS2O43903 313 aaKnown RBP24.9■■□□□ 1.58
MBD3-208ENST00000590830 ARL2P36404 184 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 BTG3Q14201 252 aaPredicted RBP24.9■■□□□ 1.58
MBD3-208ENST00000590830 FBXO22Q8NEZ5 403 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 ERMNQ8TAM6 284 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 TCP11Q8WWU5 503 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 SNX21Q969T3 373 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 INTS4Q96HW7 963 aaKnown RBP24.9■■□□□ 1.58
MBD3-208ENST00000590830 NACC1Q96RE7 527 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 PRDM6Q9NQX0 595 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 FOXD4L1Q9NU39 408 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 DBR1Q9UK59 544 aaKnown RBP24.9■■□□□ 1.58
MBD3-208ENST00000590830 LRFN2Q9ULH4 789 aa24.9■■□□□ 1.58
MBD3-208ENST00000590830 PP2D1A8MPX8 630 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 LAD1O00515 517 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 DGAT1O75907 488 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 PRPHP41219 470 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 ATP2C1P98194 919 aaPredicted RBP24.89■■□□□ 1.58
MBD3-208ENST00000590830 PAN2Q504Q3 1202 aaKnown RBP24.89■■□□□ 1.58
MBD3-208ENST00000590830 CMTR2Q8IYT2 770 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms