RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CTAGE3PQ8IX95 158 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 SLC35G2Q8TBE7 412 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 SGK1O00141 431 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 RPSAP08865 295 aaKnown RBP18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 GALCP54803 685 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 LMNB2Q03252 620 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 FAM160B2Q86V87 743 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 SLC4A9Q96Q91 983 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 I3L4J1 428 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 KIAA0895Q8NCT3 520 aa18.44■□□□□ 0.54
SMARCA4-215ENST00000590574 HADHQ16836 314 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 DUSP9Q99956 384 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 LXNQ9BS40 222 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 TRIM51Q9BSJ1 452 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ITIH3Q06033 890 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 TSNAXIP1Q2TAA8 658 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 CENPPQ6IPU0 288 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ZNF473Q8WTR7 871 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ANKS1AQ92625 1134 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 NUP85Q9BW27 656 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 SEL1LQ9UBV2 794 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 CNOT8Q9UFF9 292 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 LRRC10BA6NIK2 292 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 GLG1Q92896 1179 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ANAPC7Q9UJX3 599 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 RAD17O75943 681 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ADRA2BP18089 450 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 DDX42Q86XP3 938 aaKnown RBP eCLIP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 TMEM139Q8IV31 216 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ZNF564Q8TBZ8 553 aaPredicted RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 FRMD3A2A2Y4 597 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 SLC16A4O15374 487 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 HIP1RO75146 1068 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 BRDTQ58F21 947 aaPredicted RBP18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 CFAP157Q5JU67 520 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 ANKRD35Q8N283 1001 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 KLHL29Q96CT2 875 aa18.43■□□□□ 0.54
SMARCA4-215ENST00000590574 EMSYQ7Z589 1322 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 KRT1P04264 644 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 CHRNA3P32297 505 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 YWHAEP62258 255 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 SP8Q8IXZ3 490 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 TNFAIP1Q13829 316 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 KLHDC7AQ5VTJ3 777 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 DMGDHQ9UI17 866 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 A0A087X0T9 212 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 FAM187AA6NFU0 413 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 EVI5O60447 810 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 FAM228BP0C875 321 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 IL17AQ16552 155 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 LGSNQ5TDP6 509 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 NUGGCQ68CJ6 796 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 CCT8L2Q96SF2 557 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 ECE2O60344 883 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 PRLRP16471 622 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 AGPAT1Q99943 283 aa18.42■□□□□ 0.54
SMARCA4-215ENST00000590574 WNT7AO00755 349 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 CDC42EP5Q6NZY7 148 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 CCDC137Q6PK04 289 aaKnown RBP18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 PODNQ7Z5L7 613 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 TBC1D1Q86TI0 1168 aaPredicted RBP18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.41■□□□□ 0.544e-6■■■■■ 29.8
SMARCA4-215ENST00000590574 MRPL47Q9HD33 250 aaKnown RBP18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 MEFVO15553 781 aaPredicted RBP18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 LSP1P33241 339 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 TRIM68Q6AZZ1 485 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 GJB7Q6PEY0 223 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 CASKIN2Q8WXE0 1202 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 PACSIN1Q9BY11 444 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 STK33Q9BYT3 514 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 SUGT1Q9Y2Z0 365 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 CATSPER3Q86XQ3 398 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 HVCN1Q96D96 273 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 HEMGNQ9BXL5 484 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 MAP2K7O14733 419 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 AS3MTQ9HBK9 375 aa18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 TRPC5Q9UL62 973 aaPredicted RBP18.41■□□□□ 0.54
SMARCA4-215ENST00000590574 MMP10P09238 476 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 FMO5P49326 533 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 MTMR1Q13613 665 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 ZC2HC1CQ53FD0 456 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 FBXW10Q5XX13 1052 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 FAM81BQ96LP2 452 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 TUFT1Q9NNX1 390 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 ODF2LQ9ULJ1 636 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 IPO5O00410 1097 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 TNNC2P02585 160 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 GUCY2CP25092 1073 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 PPP1R12CQ9BZL4 782 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 EXOC1LA0A1B0GW35 172 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 TMEM191BP0C7N4 346 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms