RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 BICDL2A1A5D9 508 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 CCDC169A6NNP5 214 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 NOL4O94818 638 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 NEK3P51956 506 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 TXNRD1Q16881 649 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 PRUNE1Q86TP1 453 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 ASAP3Q8TDY4 903 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 CENPTQ96BT3 561 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 C18orf8Q96DM3 657 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 TRIM7Q9C029 511 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 PABPC3Q9H361 631 aaKnown RBP16.38■□□□□ 0.21
CIRBP-228ENST00000590347 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
CIRBP-228ENST00000590347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-228ENST00000590347 UNC5CO95185 931 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 USP11P51784 963 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 DR1Q01658 176 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
CIRBP-228ENST00000590347 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 DNAJC14Q6Y2X3 702 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-228ENST00000590347 LRRC8CQ8TDW0 803 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 ZFAND2BQ8WV99 257 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 CDK5RAP3Q96JB5 506 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
CIRBP-228ENST00000590347 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.38■□□□□ 0.21
CIRBP-228ENST00000590347 A6NJR5 290 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 PDIA5Q14554 519 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 SLC18A3Q16572 532 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
CIRBP-228ENST00000590347 SNX30Q5VWJ9 437 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 DSTYKQ6XUX3 929 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 PWWP2AQ96N64 755 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
CIRBP-228ENST00000590347 CPVLQ9H3G5 476 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 ATP6V0A2Q9Y487 856 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 DAAM1Q9Y4D1 1078 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 GLI3P10071 1580 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 TECP42680 631 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 SIK1P57059 783 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 DIXDC1Q155Q3 683 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 BCL9O00512 1426 aa16.37■□□□□ 0.21
CIRBP-228ENST00000590347 TMEM110-MUSTN1A8MSY1 372 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 ANKRD63C9JTQ0 380 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 TRAF5O00463 557 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 ZNF189O75820 626 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 OAS1P00973 400 aaKnown RBP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 SERPING1P05155 500 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 IMPDH2P12268 514 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 STX2P32856 288 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 KCNJ1P48048 391 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 CNPY1Q3B7I2 92 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 CUEDC2Q9H467 287 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 RPTORQ8N122 1335 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 FAM200BP0CF97 657 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 CTSWP56202 376 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 CABP7Q86V35 215 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 CARD9Q9H257 536 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 SPAG7O75391 227 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 FLOT1O75955 427 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 FUT2Q10981 343 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 ZNF571Q7Z3V5 609 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 NMD3Q96D46 503 aaKnown RBP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 BICD1Q96G01 975 aa16.36■□□□□ 0.21
CIRBP-228ENST00000590347 SUDS3Q9H7L9 328 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-228ENST00000590347 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 BMP15O95972 392 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 LBRQ14739 615 aaKnown RBP16.35■□□□□ 0.21
CIRBP-228ENST00000590347 GJB7Q6PEY0 223 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 CEP128Q6ZU80 1094 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
CIRBP-228ENST00000590347 SRRM1Q8IYB3 904 aaKnown RBP16.35■□□□□ 0.21
CIRBP-228ENST00000590347 KBTBD4Q9NVX7 518 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 NIP7Q9Y221 180 aaKnown RBP eCLIP16.35■□□□□ 0.21
CIRBP-228ENST00000590347 WASF2Q9Y6W5 498 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 MAGEB3O15480 346 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 ASIC2Q16515 512 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 KBTBD2Q8IY47 623 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 ZNF333Q96JL9 665 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 RAB3IPQ96QF0 476 aaPredicted RBP16.35■□□□□ 0.21
CIRBP-228ENST00000590347 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
CIRBP-228ENST00000590347 CAPN9O14815 690 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 CCNG1P51959 295 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 EIF3BP55884 814 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 LRRC36Q1X8D7 754 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 SPTY2D1Q68D10 685 aaPredicted RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 PALB2Q86YC2 1186 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 C4orf32Q8N8J7 132 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 GJA10Q969M2 543 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms