RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	BMP2K	Q9NSY1	1161 aa	Predicted RBP	19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	SUCLA2	Q9P2R7	463 aa	Predicted RBP	19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	PPME1	Q9Y570	386 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	LPXN	O60711	386 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	FGFR4	P22455	802 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	EIF4B	P23588	611 aa	Known RBP	19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	RARRES1	P49788	294 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	NFX1	Q12986	1120 aa	Known RBP	19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	RILPL1	Q5EBL4	403 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	XKR9	Q5GH70	373 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	ZNF689	Q96CS4	500 aa	Predicted RBP	19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	FTHL17	Q9BXU8	183 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	TUFT1	Q9NNX1	390 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	ANKEF1	Q9NU02	776 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	FOXD4L1	Q9NU39	408 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	INSL6	Q9Y581	213 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867	UNC80	Q8N2C7	3258 aa		19.34	■□□□□ 0.69
MBD1-221	ENST00000589867		A0A0C4DFX4	3053 aa		19.33	■□□□□ 0.69
MBD1-221	ENST00000589867	COL4A4	P53420	1690 aa	Predicted RBP	19.33	■□□□□ 0.69
MBD1-221	ENST00000589867		A0A087WZ62	844 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	PP2D1	A8MPX8	630 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867		C9IYK1	514 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	SYT1	P21579	422 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	RPA1	P27694	616 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	RFC5	P40937	340 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	ATP2C1	P98194	919 aa	Predicted RBP	19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	EMC2	Q15006	297 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	POTEG	Q6S5H5	508 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	OTUD6A	Q7L8S5	288 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	FDXACB1	Q9BRP7	624 aa	Predicted RBP	19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	MMTAG2	Q9BU76	263 aa	Known RBP	19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	IFT122	Q9HBG6	1241 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	MYO7A	Q13402	2215 aa		19.33	■□□□□ 0.68
MBD1-221	ENST00000589867	GPR182	O15218	404 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	XRCC6	P12956	609 aa	Known RBP eCLIP	19.32	■□□□□ 0.68	2e-6	■■■■■ 29.9
MBD1-221	ENST00000589867	PRPH	P41219	470 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	POLG	P54098	1239 aa	Predicted RBP	19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	ERVK-21	P61565	698 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	FAM189B	P81408	668 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	FERMT3	Q86UX7	667 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	RHPN2	Q8IUC4	686 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	ZNF710	Q8N1W2	664 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	PRPF31	Q8WWY3	499 aa	Known RBP	19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	ADAM2	Q99965	735 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	RGS18	Q9NS28	235 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	NLRC5	Q86WI3	1866 aa		19.32	■□□□□ 0.68
MBD1-221	ENST00000589867	DGKI	O75912	1065 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	FOSL2	P15408	326 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	CDC25A	P30304	524 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	GATM	P50440	423 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	REST	Q13127	1097 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	PDIA5	Q14554	519 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	ZNF410	Q86VK4	478 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	NLRP7	Q8WX94	980 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	SLC7A3	Q8WY07	619 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	ARNTL2	Q8WYA1	636 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	JPH2	Q9BR39	696 aa	Predicted RBP	19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	C17orf80	Q9BSJ5	609 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	MINDY3	Q9H8M7	445 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	MTMR6	Q9Y217	621 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	COL4A3BP	Q9Y5P4	624 aa		19.31	■□□□□ 0.68
MBD1-221	ENST00000589867	KIAA1671	Q9BY89	1806 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	LAD1	O00515	517 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	ARL2	P36404	184 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	SARS	P49591	514 aa	Known RBP	19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	DNM2	P50570	870 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	LAMTOR4	Q0VGL1	99 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	NPAS4	Q8IUM7	802 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	ASAP3	Q8TDY4	903 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	NLRP4	Q96MN2	994 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	YME1L1	Q96TA2	773 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	RNF19A	Q9NV58	838 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	LRWD1	Q9UFC0	647 aa		19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	DBR1	Q9UK59	544 aa	Known RBP	19.3	■□□□□ 0.68
MBD1-221	ENST00000589867	BRWD1	Q9NSI6	2320 aa		19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	VPS37C	A5D8V6	355 aa	Predicted RBP	19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	GRB10	Q13322	594 aa		19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	FAM173B	Q6P4H8	233 aa		19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	FAM43B	Q6ZT52	329 aa	Predicted RBP	19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	BRAP	Q7Z569	592 aa		19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	PSPC1	Q8WXF1	523 aa	Known RBP	19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	TGS1	Q96RS0	853 aa	Known RBP	19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	MTR	Q99707	1265 aa		19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	GCOM2	Q9BZD3	368 aa	Predicted RBP	19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	GPRC5C	Q9NQ84	441 aa		19.29	■□□□□ 0.68
MBD1-221	ENST00000589867	RALGAPA2	Q2PPJ7	1873 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	GAS2	O43903	313 aa	Known RBP	19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	DGAT1	O75907	488 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	ATF7	P17544	494 aa	Predicted RBP	19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	POU3F3	P20264	500 aa	Predicted RBP	19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	CCT6A	P40227	531 aa	Known RBP	19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	CDC42EP1	Q00587	391 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	GRIN1	Q05586	938 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	SLC24A5	Q71RS6	500 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	KCNK18	Q7Z418	384 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	EXOC8	Q8IYI6	725 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	MAFA	Q8NHW3	353 aa	Predicted RBP	19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	NACC1	Q96RE7	527 aa		19.28	■□□□□ 0.68
MBD1-221	ENST00000589867	MTUS1	Q9ULD2	1270 aa		19.28	■□□□□ 0.68

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