RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PACSIN1Q9BY11 444 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 CAPN6Q9Y6Q1 641 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 PGRMC1O00264 195 aaKnown RBP15.77■□□□□ 0.12
RETREG3-208ENST00000589797 PPP1R11O60927 126 aaPredicted RBP15.77■□□□□ 0.12
RETREG3-208ENST00000589797 NPY5RQ15761 445 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 BSPRYQ5W0U4 402 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 CENPPQ6IPU0 288 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 RPUSD2Q8IZ73 545 aaKnown RBP15.77■□□□□ 0.12
RETREG3-208ENST00000589797 C7orf31Q8N865 590 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 ANKRD42Q8N9B4 389 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 ZNF280CQ8ND82 737 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 SHISA4Q96DD7 197 aa15.77■□□□□ 0.12
RETREG3-208ENST00000589797 PSMC5P62195 406 aa15.77■□□□□ 0.11
RETREG3-208ENST00000589797 SPATA4Q8NEY3 305 aa15.77■□□□□ 0.11
RETREG3-208ENST00000589797 ANKS1AQ92625 1134 aa15.77■□□□□ 0.11
RETREG3-208ENST00000589797 HAUS1Q96CS2 278 aa15.77■□□□□ 0.11
RETREG3-208ENST00000589797 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
RETREG3-208ENST00000589797 PDXKO00764 312 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 N4BP1O75113 896 aaKnown RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 AKAP3O75969 853 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 CASP5P51878 434 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 GIT2Q14161 759 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 TRIM65Q6PJ69 517 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 INTS8Q75QN2 995 aaKnown RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ZNF354CQ86Y25 554 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 BCAS4Q8TDM0 211 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 TNFRSF25Q93038 417 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 SLC10A4Q96EP9 437 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 INTS2Q9H0H0 1204 aaKnown RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ORC2Q13416 577 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 PPP2R5DQ14738 602 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ECM1Q16610 540 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 TMEM270Q6UE05 265 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 MXRA8Q9BRK3 442 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 PLCB1Q9NQ66 1216 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 TMX2Q9Y320 296 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 SNX24Q9Y343 169 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 LMO7Q8WWI1 1683 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 TISP43B9A030 160 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 E7EVH7 732 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 CTIFO43310 598 aaKnown RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ATMINO43313 823 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 EVI5O60447 810 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 KIF4AO95239 1232 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 TBC1D8O95759 1140 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 OTUD6BQ8N6M0 293 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 SYT2Q8N9I0 419 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 POP1Q99575 1024 aaKnown RBP15.76■□□□□ 0.11
RETREG3-208ENST00000589797 CCDC77Q9BR77 488 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ARHGAP20Q9P2F6 1191 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 ZNF148Q9UQR1 794 aa15.76■□□□□ 0.11
RETREG3-208ENST00000589797 EPHB6O15197 1021 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 COPB2P35606 906 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 IFNAR2P48551 515 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 HDLBPQ00341 1268 aaKnown RBP15.75■□□□□ 0.11
RETREG3-208ENST00000589797 PPFIA1Q13136 1202 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 RHPN2Q8IUC4 686 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 ADAM21Q9UKJ8 722 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 CLDN3O15551 220 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 DHX9Q08211 1270 aaKnown RBP15.75■□□□□ 0.11
RETREG3-208ENST00000589797 MMTAG2Q9BU76 263 aaKnown RBP15.75■□□□□ 0.11
RETREG3-208ENST00000589797 KRT76Q01546 638 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 CDHR1Q96JP9 859 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 C11orf70Q9BRQ4 267 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 CBWD1Q9BRT8 395 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 AMACRQ9UHK6 382 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 PLAGL2Q9UPG8 496 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 NOD1Q9Y239 953 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 FGRP09769 529 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 SLC35G1Q2M3R5 365 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 ELOA2Q8IYF1 753 aaPredicted RBP15.75■□□□□ 0.11
RETREG3-208ENST00000589797 POLR3FQ9H1D9 316 aaPredicted RBP15.75■□□□□ 0.11
RETREG3-208ENST00000589797 ACAD9Q9H845 621 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 DAAM1Q9Y4D1 1078 aa15.75■□□□□ 0.11
RETREG3-208ENST00000589797 ITIH6Q6UXX5 1313 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 KLRC4O43908 158 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 PPP1R21Q6ZMI0 780 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 ARFGAP2Q8N6H7 521 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 ANKRD7Q92527 254 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 STIM2Q9P246 746 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 MEIS2O14770 477 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 WDR46O15213 610 aaKnown RBP15.74■□□□□ 0.11
RETREG3-208ENST00000589797 IVLP07476 585 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 SREBF1P36956 1147 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 GALCP54803 685 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 IFRD2Q12894 506 aaPredicted RBP15.74■□□□□ 0.11
RETREG3-208ENST00000589797 FAM160B1Q5W0V3 765 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 PNKPQ96T60 521 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 JPH1Q9HDC5 661 aaPredicted RBP15.74■□□□□ 0.11
RETREG3-208ENST00000589797 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 ATRNO75882 1429 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 IREB2P48200 963 aaKnown RBP15.74■□□□□ 0.11
RETREG3-208ENST00000589797 FMO5P49326 533 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 MED15Q96RN5 788 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 TEX13BQ9BXU2 312 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 FGFBP2Q9BYJ0 223 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms