RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	LOC102724159	A0A0B4J2E5	919 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318		A0A1W2PQC6	194 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	PDXK	O00764	312 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	TGFB1I1	O43294	461 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	TBC1D8	O95759	1140 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	ATP4A	P20648	1035 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	ADK	P55263	362 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	RBL2	Q08999	1139 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	PWP2	Q15269	919 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	XKR9	Q5GH70	373 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	MIS18BP1	Q6P0N0	1132 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	MAEA	Q7L5Y9	396 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	TRMT1L	Q7Z2T5	733 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	FAM178B	Q8IXR5	827 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	PARK7	Q99497	189 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	GSTTP1	A0A1W2PQM5	241 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	DNM2	P50570	870 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	MARS	P56192	900 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	PRKCE	Q02156	737 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	LY6K	Q17RY6	165 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	ZNF792	Q3KQV3	632 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	TTC31	Q49AM3	519 aa	Predicted RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	NOC4L	Q9BVI4	516 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	TIPIN	Q9BVW5	301 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	IKZF4	Q9H2S9	585 aa		16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	TYW1	Q9NV66	732 aa	Known RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	MAFB	Q9Y5Q3	323 aa	Predicted RBP	16.9	■□□□□ 0.3
DDX39A-209	ENST00000589318	RNF225	M0QZC1	329 aa	Predicted RBP	16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	CLGN	O14967	610 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	ZSCAN12	O43309	604 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	DKC1	O60832	514 aa	Known RBP eCLIP	16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	UBE4B	O95155	1302 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	ADORA2A	P29274	412 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	FXR1	P51114	621 aa	Known RBP eCLIP	16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	NEDD9	Q14511	834 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	SAPCD2	Q86UD0	394 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	KSR1	Q8IVT5	923 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	FBXO16	Q8IX29	292 aa	Predicted RBP	16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	ABRA	Q8N0Z2	381 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	PPM1E	Q8WY54	764 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	PCYT2	Q99447	389 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	MPHOSPH6	Q99547	160 aa	Known RBP	16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	GPRC5C	Q9NQ84	441 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	PDLIM7	Q9NR12	457 aa		16.89	■□□□□ 0.29
DDX39A-209	ENST00000589318	ADGRA2	Q96PE1	1338 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	PASK	Q96RG2	1323 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	RASSF10	A6NK89	507 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	GGPS1	O95749	300 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	MAPT	P10636	758 aa	Known RBP	16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	PLS3	P13797	630 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	NR2F2	P24468	414 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	ADAM9	Q13443	819 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	BRD3	Q15059	726 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	MAN2A1	Q16706	1144 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	FAM110C	Q1W6H9	321 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	VWA3B	Q502W6	1294 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	CCDC62	Q6P9F0	684 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	METTL7B	Q6UX53	244 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	RABGGTA	Q92696	567 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	LARS	Q9P2J5	1176 aa	Known RBP	16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	ADAM21	Q9UKJ8	722 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	AKR1B15	C9JRZ8	316 aa	Predicted RBP	16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	IGF2BP3	O00425	579 aa	Known RBP eCLIP	16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	MFAP3L	O75121	409 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	CASP14	P31944	242 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	ZNF157	P51786	506 aa	Predicted RBP	16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	OTUD6A	Q7L8S5	288 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	TRIM59	Q8IWR1	403 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	REXO1L1P	Q8IX06	675 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	CEP170P1	Q96L14	293 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	CCDC43	Q96MW1	224 aa	Known RBP	16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	ERGIC2	Q96RQ1	377 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	NDST4	Q9H3R1	872 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	JRKL	Q9Y4A0	524 aa		16.88	■□□□□ 0.29
DDX39A-209	ENST00000589318	ZNF236	Q9UL36	1845 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	CCDC151	A5D8V7	595 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	ASB14	A6NK59	587 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	PES1	O00541	588 aa	Known RBP	16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	STRN	O43815	780 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	CALU	O43852	315 aa	Predicted RBP	16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	TBC1D8B	Q0IIM8	1120 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	NFIL3	Q16649	462 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	XKR3	Q5GH77	459 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	TMEM63B	Q5T3F8	832 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	KCNV1	Q6PIU1	500 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	PPFIBP1	Q86W92	1011 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	SUGP1	Q8IWZ8	645 aa	Known RBP	16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	CPLX3	Q8WVH0	158 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	DRC1	Q96MC2	740 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	PANX2	Q96RD6	677 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	DEF6	Q9H4E7	631 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	XPNPEP1	Q9NQW7	623 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	ZNF302	Q9NR11	478 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	CYP26B1	Q9NR63	512 aa		16.87	■□□□□ 0.29
DDX39A-209	ENST00000589318	DOCK3	Q8IZD9	2030 aa		16.86	■□□□□ 0.29
DDX39A-209	ENST00000589318	CETN3	O15182	167 aa		16.86	■□□□□ 0.29
DDX39A-209	ENST00000589318	GNA14	O95837	355 aa		16.86	■□□□□ 0.29
DDX39A-209	ENST00000589318	NR3C1	P04150	777 aa		16.86	■□□□□ 0.29
DDX39A-209	ENST00000589318	KLK7	P49862	253 aa		16.86	■□□□□ 0.29
DDX39A-209	ENST00000589318	CELF3	Q5SZQ8	465 aa	Known RBP	16.86	■□□□□ 0.29

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms