RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ZIM2Q9NZV7 527 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 TMEFF2Q9UIK5 374 aaPredicted RBP9.41□□□□□ -0.9
ATG4D-210ENST00000588972 TRHDEQ9UKU6 1024 aa9.41□□□□□ -0.9
ATG4D-210ENST00000588972 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 M0R2C6 588 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 CBX4O00257 560 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
ATG4D-210ENST00000588972 ECE2O60344 883 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 PEX14O75381 377 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.9
ATG4D-210ENST00000588972 APPP05067 770 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 IREB2P48200 963 aaKnown RBP9.4□□□□□ -0.9
ATG4D-210ENST00000588972 PKN2Q16513 984 aaKnown RBP9.4□□□□□ -0.9
ATG4D-210ENST00000588972 KSR2Q6VAB6 950 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 RASAL3Q86YV0 1011 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
ATG4D-210ENST00000588972 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 NXPE1Q8N323 547 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 SSH1Q8WYL5 1049 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 UTP4Q969X6 686 aaKnown RBP9.4□□□□□ -0.9
ATG4D-210ENST00000588972 CDCA5Q96FF9 252 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 EYA3Q99504 573 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 ISCA1Q9BUE6 129 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 HDAC8Q9BY41 377 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 GPR27Q9NS67 375 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 RIPOR2Q9Y4F9 1068 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 SCN9AQ15858 1988 aa9.4□□□□□ -0.9
ATG4D-210ENST00000588972 COL4A1P02462 1669 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 GABRDO14764 452 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 TPD52L2O43399 206 aaKnown RBP9.39□□□□□ -0.91
ATG4D-210ENST00000588972 MSCO60682 206 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 F2P00734 622 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 SPATA31C1P0DKV0 1188 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 PYGMP11217 842 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 IFNGR1P15260 489 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 FKBP1BP68106 108 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 DSG1Q02413 1049 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 CCDC103Q8IW40 242 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 FAM20CQ8IXL6 584 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 IGSF22Q8N9C0 903 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATG4D-210ENST00000588972 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
ATG4D-210ENST00000588972 CHMP4CQ96CF2 233 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 FCRL3Q96P31 734 aaPredicted RBP9.39□□□□□ -0.91
ATG4D-210ENST00000588972 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
ATG4D-210ENST00000588972 PSME4Q14997 1843 aa9.39□□□□□ -0.91
ATG4D-210ENST00000588972 PRR33A8MZF0 331 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 IGKV5-2P06315 115 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 FAM87AP0C7U9 286 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 LTBRP36941 435 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 ADCYAP1R1P41586 468 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 NRG1Q02297 640 aaPredicted RBP9.38□□□□□ -0.91
ATG4D-210ENST00000588972 PIN1Q13526 163 aaPredicted RBP9.38□□□□□ -0.91
ATG4D-210ENST00000588972 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 E4F1Q66K89 784 aaPredicted RBP9.38□□□□□ -0.91
ATG4D-210ENST00000588972 C22orf34Q6ZV56 151 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 ZC3H7AQ8IWR0 971 aaKnown RBP9.38□□□□□ -0.91
ATG4D-210ENST00000588972 DAGLBQ8NCG7 672 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
ATG4D-210ENST00000588972 HOOK2Q96ED9 719 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 FAM89AQ96GI7 184 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 YTHDC1Q96MU7 727 aaKnown RBP9.38□□□□□ -0.91
ATG4D-210ENST00000588972 CDH19Q9H159 772 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 SMC4Q9NTJ3 1288 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 POLLQ9UGP5 575 aa9.38□□□□□ -0.91
ATG4D-210ENST00000588972 PITPNM2Q9BZ72 1349 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 MYH3P11055 1940 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 C9orf172C9J069 976 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 CKMP06732 381 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 PLS3P13797 630 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 GNALP38405 381 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
ATG4D-210ENST00000588972 GPSM2P81274 684 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 TNK2Q07912 1038 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
ATG4D-210ENST00000588972 PAOXQ6QHF9 649 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 LBX2Q6XYB7 198 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 ZBTB46Q86UZ6 589 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
ATG4D-210ENST00000588972 CHPFQ8IZ52 775 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 GIMAP7Q8NHV1 300 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 PCDH19Q8TAB3 1148 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 TBC1D16Q8TBP0 767 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 PIWIL2Q8TC59 973 aaKnown RBP9.37□□□□□ -0.91
ATG4D-210ENST00000588972 DNAAF4Q8WXU2 420 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 GCC1Q96CN9 775 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 AASDHPPTQ9NRN7 309 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 CWC25Q9NXE8 425 aaPredicted RBP9.37□□□□□ -0.91
ATG4D-210ENST00000588972 HDAC9Q9UKV0 1011 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 SPEF2Q9C093 1822 aa9.37□□□□□ -0.91
ATG4D-210ENST00000588972 ASTN2O75129 1339 aaPredicted RBP9.36□□□□□ -0.91
ATG4D-210ENST00000588972 E2F8A0AVK6 867 aa9.36□□□□□ -0.91
ATG4D-210ENST00000588972 WDR64B1ANS9 1081 aa9.36□□□□□ -0.91
ATG4D-210ENST00000588972 PRKD3O94806 890 aa9.36□□□□□ -0.91
ATG4D-210ENST00000588972 FKBP9O95302 570 aa9.36□□□□□ -0.91
ATG4D-210ENST00000588972 ZNF865P0CJ78 1059 aaPredicted RBP9.36□□□□□ -0.91
ATG4D-210ENST00000588972 LCP1P13796 627 aa9.36□□□□□ -0.91
ATG4D-210ENST00000588972 BMP8BP34820 402 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms