RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 NECTIN4Q96NY8 510 aa18.88■□□□□ 0.61
SEC11C-205ENST00000588875 LSG1Q9H089 658 aaKnown RBP18.88■□□□□ 0.61
SEC11C-205ENST00000588875 ADAMTS10Q9H324 1103 aa18.88■□□□□ 0.61
SEC11C-205ENST00000588875 V9GY48 417 aaPredicted RBP18.88■□□□□ 0.61
SEC11C-205ENST00000588875 CNTNAP5Q8WYK1 1306 aa18.88■□□□□ 0.61
SEC11C-205ENST00000588875 VPS13AQ96RL7 3174 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 IGLV3-22A0A075B6J6 115 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 HOXA2O43364 376 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 NLRP11P59045 1033 aaKnown RBP18.87■□□□□ 0.61
SEC11C-205ENST00000588875 PPP1R18Q6NYC8 613 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 CKAP2LQ8IYA6 745 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 ABI1Q8IZP0 508 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 LINC01465Q8N7H1 131 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 C12orf76Q8N812 135 aaPredicted RBP18.87■□□□□ 0.61
SEC11C-205ENST00000588875 MYO10Q9HD67 2058 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 LIMD1Q9UGP4 676 aa18.87■□□□□ 0.61
SEC11C-205ENST00000588875 NT5C1B-RDH14C9J2C7 533 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 IPO5O00410 1097 aaKnown RBP18.86■□□□□ 0.61
SEC11C-205ENST00000588875 CXCL14O95715 111 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 ZSCAN20P17040 1043 aaPredicted RBP18.86■□□□□ 0.61
SEC11C-205ENST00000588875 AP3B2Q13367 1082 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 RARS2Q5T160 578 aaKnown RBP18.86■□□□□ 0.61
SEC11C-205ENST00000588875 ASTLQ6HA08 431 aaPredicted RBP18.86■□□□□ 0.61
SEC11C-205ENST00000588875 ZDHHC14Q8IZN3 488 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 RNF169Q8NCN4 708 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 FEZF2Q8TBJ5 459 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 CRYGNQ8WXF5 182 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 ZNF668Q96K58 619 aaPredicted RBP18.86■□□□□ 0.61
SEC11C-205ENST00000588875 GVINP1Q7Z2Y8 2422 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 EVPLQ92817 2033 aa18.86■□□□□ 0.61
SEC11C-205ENST00000588875 ADAMTS3O15072 1205 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 EIF4BP23588 611 aaKnown RBP18.85■□□□□ 0.61
SEC11C-205ENST00000588875 MTHFRP42898 656 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 JAKMIP3Q5VZ66 844 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 CREB3L3Q68CJ9 461 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 EFCAB12Q6NXP0 572 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 FRMD5Q7Z6J6 570 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 ZNF598Q86UK7 904 aaKnown RBP18.85■□□□□ 0.61
SEC11C-205ENST00000588875 HELQQ8TDG4 1101 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 BARHL2Q9NY43 387 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 AKT3Q9Y243 479 aa18.85■□□□□ 0.61
SEC11C-205ENST00000588875 A0A0U1RQF3 1178 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 MAGEB2O15479 319 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 CYP3A4P08684 503 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 FGFR4P22455 802 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 METAP2P50579 478 aaKnown RBP eCLIP18.84■□□□□ 0.61
SEC11C-205ENST00000588875 BCAR1P56945 870 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 NECTIN1Q15223 517 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 ZNF746Q6NUN9 644 aaPredicted RBP18.84■□□□□ 0.61
SEC11C-205ENST00000588875 APOA5Q6Q788 366 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 LRRC71Q8N4P6 559 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 AUTS2Q8WXX7 1259 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 CCDC136Q96JN2 1154 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 TBC1D22BQ9NU19 505 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 RBM28Q9NW13 759 aaKnown RBP18.84■□□□□ 0.61
SEC11C-205ENST00000588875 GABBR1Q9UBS5 961 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 BRPF3Q9ULD4 1205 aa18.84■□□□□ 0.61
SEC11C-205ENST00000588875 EOMESO95936 686 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 EPCAMP16422 314 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 CLCN5P51795 746 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 ATAT1Q5SQI0 421 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 KIAA1841Q6NSI8 718 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 SYNE3Q6ZMZ3 975 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 SKAP1Q86WV1 359 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 TDRD5Q8NAT2 981 aaKnown RBP18.83■□□□□ 0.6
SEC11C-205ENST00000588875 FAM217BQ9NTX9 383 aaPredicted RBP18.83■□□□□ 0.6
SEC11C-205ENST00000588875 PCDHA10Q9Y5I2 948 aa18.83■□□□□ 0.6
SEC11C-205ENST00000588875 hCG_1984214I3L0E3 225 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 ZNF862O60290 1169 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 NEFLP07196 543 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 PSAPP07602 524 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 DARSP14868 501 aaKnown RBP18.82■□□□□ 0.6
SEC11C-205ENST00000588875 CA8P35219 290 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 ALDH7A1P49419 539 aaKnown RBP18.82■□□□□ 0.6
SEC11C-205ENST00000588875 GPC3P51654 580 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 TMEM173Q86WV6 379 aaPredicted RBP18.82■□□□□ 0.6
SEC11C-205ENST00000588875 VPS52Q8N1B4 723 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 PLCD3Q8N3E9 789 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 ZNF713Q8N859 430 aaPredicted RBP18.82■□□□□ 0.6
SEC11C-205ENST00000588875 SLC22A17Q8WUG5 538 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 MAP7D2Q96T17 732 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 ZBP1Q9H171 429 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 MFSD1Q9H3U5 465 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 DBR1Q9UK59 544 aaKnown RBP18.82■□□□□ 0.6
SEC11C-205ENST00000588875 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 USTQ9Y2C2 406 aa18.82■□□□□ 0.6
SEC11C-205ENST00000588875 DCHS1Q96JQ0 3298 aa18.81■□□□□ 0.6
SEC11C-205ENST00000588875 PI15O43692 258 aa18.81■□□□□ 0.6
SEC11C-205ENST00000588875 CSDE1O75534 798 aaKnown RBP18.81■□□□□ 0.6
SEC11C-205ENST00000588875 NPR3P17342 541 aa18.81■□□□□ 0.6
SEC11C-205ENST00000588875 TMOD1P28289 359 aa18.81■□□□□ 0.6
SEC11C-205ENST00000588875 RTN1Q16799 776 aa18.81■□□□□ 0.6
SEC11C-205ENST00000588875 CWF19L1Q69YN2 538 aaKnown RBP18.81■□□□□ 0.6
SEC11C-205ENST00000588875 SMAP1Q8IYB5 467 aaPredicted RBP18.81■□□□□ 0.6
SEC11C-205ENST00000588875 FLCNQ8NFG4 579 aa18.81■□□□□ 0.6
SEC11C-205ENST00000588875 NKD2Q969F2 451 aaPredicted RBP18.81■□□□□ 0.6
SEC11C-205ENST00000588875 GLT8D2Q9H1C3 349 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms