RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.5■■□□□ 1.19
DDX39A-207ENST00000588542 GRXCR1A8MXD5 290 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 E9PMD0 336 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 CABP7Q86V35 215 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 RHPN2Q8IUC4 686 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 KSR1Q8IVT5 923 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 CCDC43Q96MW1 224 aaKnown RBP22.5■■□□□ 1.19
DDX39A-207ENST00000588542 CSRNP2Q9H175 543 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 ATP6V0A4Q9HBG4 840 aa22.5■■□□□ 1.19
DDX39A-207ENST00000588542 USO1O60763 962 aaKnown RBP22.49■■□□□ 1.19
DDX39A-207ENST00000588542 EFCAB14O75071 495 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 DEFB103AP81534 67 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 SMAD3P84022 425 aaKnown RBP22.49■■□□□ 1.19
DDX39A-207ENST00000588542 TMEM119Q4V9L6 283 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■■■■□ 20.8
DDX39A-207ENST00000588542 FAM228AQ86W67 206 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 TCP11Q8WWU5 503 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 PRPF31Q8WWY3 499 aaKnown RBP22.49■■□□□ 1.19
DDX39A-207ENST00000588542 CLIC6Q96NY7 704 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 BHMT2Q9H2M3 363 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 ERVK-5Q9HDB9 667 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 DAXXQ9UER7 740 aaPredicted RBP22.49■■□□□ 1.19
DDX39A-207ENST00000588542 COL4A3BPQ9Y5P4 624 aa22.49■■□□□ 1.19
DDX39A-207ENST00000588542 TTC3P53804 2025 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 A0A087WZ62 844 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-207ENST00000588542 ARHGEF35A5YM69 484 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 RPS6KA5O75582 802 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 EYA4O95677 639 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 DARSP14868 501 aaKnown RBP22.48■■□□□ 1.19
DDX39A-207ENST00000588542 ATP2A2P16615 1042 aaKnown RBP22.48■■□□□ 1.19
DDX39A-207ENST00000588542 DDIT3P35638 169 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 CDC42EP1Q00587 391 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 PAK2Q13177 524 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 STK38Q15208 465 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 PADI6Q6TGC4 694 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 USP49Q70CQ1 688 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 NLRP7Q8WX94 980 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 PSPC1Q8WXF1 523 aaKnown RBP22.48■■□□□ 1.19
DDX39A-207ENST00000588542 FDXACB1Q9BRP7 624 aaPredicted RBP22.48■■□□□ 1.19
DDX39A-207ENST00000588542 TMX1Q9H3N1 280 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 DNM3Q9UQ16 869 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 CHD9Q3L8U1 2897 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 MYH11P35749 1972 aa22.48■■□□□ 1.19
DDX39A-207ENST00000588542 SLC26A4O43511 780 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 YEATS4O95619 227 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 EIF4BP23588 611 aaKnown RBP22.47■■□□□ 1.19
DDX39A-207ENST00000588542 ARL2P36404 184 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 UBA7P41226 1012 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 KCNJ6P48051 423 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 LAMTOR4Q0VGL1 99 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 ZRSR1Q15695 479 aaKnown RBP22.47■■□□□ 1.19
DDX39A-207ENST00000588542 SPECC1Q5M775 1068 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 RTN4RL1Q86UN2 441 aaPredicted RBP22.47■■□□□ 1.19
DDX39A-207ENST00000588542 ZNF410Q86VK4 478 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 PHOSPHO2Q8TCD6 241 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 LRRC15Q8TF66 581 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 LINC01599Q8WXQ3 324 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 EPSTI1Q96J88 318 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 SLC9A7Q96T83 725 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 PLIN2Q99541 437 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 NT5C3AQ9H0P0 336 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 ST3GAL5Q9UNP4 418 aa22.47■■□□□ 1.19
DDX39A-207ENST00000588542 SPTLC2O15270 562 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 CYP11B2P19099 503 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 DNM1Q05193 864 aaKnown RBP22.46■■□□□ 1.19
DDX39A-207ENST00000588542 ATL3Q6DD88 541 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 TMCO2Q7Z6W1 182 aaPredicted RBP22.46■■□□□ 1.19
DDX39A-207ENST00000588542 KCTD17Q8N5Z5 321 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 KRI1Q8N9T8 703 aaKnown RBP22.46■■□□□ 1.19
DDX39A-207ENST00000588542 ASAP3Q8TDY4 903 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 NLRP4Q96MN2 994 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 CCSER1Q9C0I3 900 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 IFT122Q9HBG6 1241 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 GPRC5CQ9NQ84 441 aa22.46■■□□□ 1.19
DDX39A-207ENST00000588542 ENPP3O14638 875 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 GPR182O15218 404 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 ASAP2O43150 1006 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 PPP6R2O75170 966 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 CSDE1O75534 798 aaKnown RBP22.45■■□□□ 1.18
DDX39A-207ENST00000588542 PBX2P40425 430 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 NFX1Q12986 1120 aaKnown RBP22.45■■□□□ 1.18
DDX39A-207ENST00000588542 KARSQ15046 597 aaKnown RBP22.45■■□□□ 1.18
DDX39A-207ENST00000588542 MAEAQ7L5Y9 396 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 HERC6Q8IVU3 1022 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 MCPH1Q8NEM0 835 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 CDK5RAP3Q96JB5 506 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 SCLT1Q96NL6 688 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 FTHL17Q9BXU8 183 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 PBX4Q9BYU1 374 aa22.45■■□□□ 1.18
DDX39A-207ENST00000588542 GCOM2Q9BZD3 368 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-207ENST00000588542 POLR3FQ9H1D9 316 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-207ENST00000588542 MGEA5O60502 916 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 SRGAP2CP0DJJ0 459 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 FGFR4P22455 802 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 GLRA2P23416 452 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 RABGGTBP53611 331 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 MXD4Q14582 209 aaPredicted RBP22.44■■□□□ 1.18
DDX39A-207ENST00000588542 ODR4Q5SWX8 454 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 SYMPKQ92797 1274 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms