RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	FRMD4B	Q9Y2L6	1034 aa		15.31	■□□□□ 0.04
NEDD4L-223	ENST00000588516		A0A087X0T9	212 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	DDTL	A6NHG4	134 aa	Predicted RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	GOLGA6L10	A6NI86	522 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ECE2	O60344	883 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	PHACTR2	O75167	634 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	FAM228B	P0C875	321 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	MAPT	P10636	758 aa	Known RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	RPS12	P25398	132 aa	Known RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	PON1	P27169	355 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	STAT3	P40763	770 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	NOP2	P46087	812 aa	Known RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	STAT2	P52630	851 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	DNAJC21	Q5F1R6	531 aa	Known RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ALKBH5	Q6P6C2	394 aa	Known RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLC17A8	Q8NDX2	589 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	GLIS3	Q8NEA6	775 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	LENG9	Q96B70	501 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	BHMT2	Q9H2M3	363 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	DNAJC18	Q9H819	358 aa		15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SUCLA2	Q9P2R7	463 aa	Predicted RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	COLQ	Q9Y215	455 aa	Predicted RBP	15.3	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SIPA1L1	O43166	1804 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	NPHP3-ACAD11	A0A0J9YXS1	232 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SRRM3	A6NNA2	597 aa	Predicted RBP	15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	KIF4A	O95239	1232 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	KLRC1	P26715	233 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	GYS2	P54840	703 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	FKBP1B	P68106	108 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLC20A2	Q08357	652 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TCP10	Q12799	353 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	MKRN3	Q13064	507 aa	Known RBP	15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	MTMR3	Q13615	1198 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	LRCH2	Q5VUJ6	765 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TCERG1L	Q5VWI1	586 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	RINT1	Q6NUQ1	792 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	LRIG3	Q6UXM1	1119 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	MAATS1	Q7Z4T9	603 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	KIAA0825	Q8IV33	1275 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	FAM186B	Q8IYM0	893 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	MYCT1	Q8N699	235 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ARFGAP2	Q8N6H7	521 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ANKRD13C	Q8N6S4	541 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	USP38	Q8NB14	1042 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLC5A5	Q92911	643 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	HSD17B14	Q9BPX1	270 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TIPIN	Q9BVW5	301 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	STK33	Q9BYT3	514 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLITRK6	Q9H5Y7	841 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	RBM12	Q9NTZ6	932 aa	Known RBP	15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	DMGDH	Q9UI17	866 aa	Known RBP	15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	NAGPA	Q9UK23	515 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	PRR12	Q9ULL5	1215 aa		15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ASTN2	O75129	1339 aa	Predicted RBP	15.29	■□□□□ 0.04
NEDD4L-223	ENST00000588516	PGRMC1	O00264	195 aa	Known RBP	15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	P4HA2	O15460	535 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ERLIN2	O94905	339 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	HEXIM1	O94992	359 aa	Known RBP	15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	JAM2	P57087	298 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SKOR1	P84550	965 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	PTK2	Q05397	1052 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	RAD51AP2	Q09MP3	1159 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TTLL12	Q14166	644 aa	Predicted RBP	15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	USH1G	Q495M9	461 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	DCAF17	Q5H9S7	520 aa	Predicted RBP	15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	MOB2	Q70IA6	237 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SIAH1	Q8IUQ4	282 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLC9A9	Q8IVB4	645 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TMEM174	Q8WUU8	243 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	INPP4A	Q96PE3	977 aa	Predicted RBP	15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	IWS1	Q96ST2	819 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	RIT2	Q99578	217 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	CAPS2	Q9BXY5	557 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TRIM17	Q9Y577	477 aa		15.28	■□□□□ 0.04
NEDD4L-223	ENST00000588516	FAM86B1	E9PN63	330 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	NCK2	O43639	380 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	GAS7	O60861	476 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ZMYND10	O75800	440 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	FAM86B2	P0C5J1	330 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	KRT13	P13646	458 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	GUCY2C	P25092	1073 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	CXCR5	P32302	372 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TM4SF4	P48230	202 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	CDR1	P51861	262 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ARID5A	Q03989	594 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	EMC10	Q5UCC4	262 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	OTOP1	Q7RTM1	612 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	NIPA1	Q7RTP0	329 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	PEX26	Q7Z412	305 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLFN11	Q7Z7L1	901 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SRL	Q86TD4	932 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ZFPM1	Q8IX07	1006 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	SLC35C1	Q96A29	364 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TEKT3	Q9BXF9	490 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	ISCU	Q9H1K1	167 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	RASSF4	Q9H2L5	321 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	TMEM206	Q9H813	350 aa		15.27	■□□□□ 0.04
NEDD4L-223	ENST00000588516	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	15.27	■□□□□ 0.04	8e-15	■□□□□ 9.1
NEDD4L-223	ENST00000588516	EPB41L5	Q9HCM4	733 aa		15.27	■□□□□ 0.04

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