RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 GPR155Q7Z3F1 870 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 PIP4P1Q86T03 277 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 AMOTL1Q8IY63 956 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ZNF710Q8N1W2 664 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ADAMTS14Q8WXS8 1223 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 MKL1Q969V6 931 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 WBP1Q96G27 269 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 TMEM169Q96HH4 297 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 SPATA33Q96N06 139 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 PHF12Q96QT6 1004 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 EMILIN2Q9BXX0 1053 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ADAMTS10Q9H324 1103 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 PIDD1Q9HB75 910 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ATP6V0A4Q9HBG4 840 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 SYNPO2Q9UMS6 1093 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
TPM4-210ENST00000588507 MRVI1Q9Y6F6 885 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 BCLAF3A2AJT9 711 aaKnown RBP8.16□□□□□ -1.1
TPM4-210ENST00000588507 PLA2G6O60733 806 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 AKAP3O75969 853 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 FGFR1P11362 822 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 C6P13671 934 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 ITPKBP27987 946 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 ZNF76P36508 570 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 POLGP54098 1239 aaPredicted RBP8.16□□□□□ -1.1
TPM4-210ENST00000588507 PAK2Q13177 524 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 GAS6Q14393 721 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 STXBP2Q15833 593 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 MYSM1Q5VVJ2 828 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 PDXDC2PQ6P474 469 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 FAM43BQ6ZT52 329 aaPredicted RBP8.16□□□□□ -1.1
TPM4-210ENST00000588507 LMBR1Q8WVP7 490 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 LIN37Q96GY3 246 aaPredicted RBP8.16□□□□□ -1.1
TPM4-210ENST00000588507 PHF20Q9BVI0 1012 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 SETD2Q9BYW2 2564 aaPredicted RBP8.16□□□□□ -1.1
TPM4-210ENST00000588507 TMEM117Q9H0C3 514 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 MAN1C1Q9NR34 630 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 C1orf112Q9NSG2 853 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 ZMYM2Q9UBW7 1377 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 DPP7Q9UHL4 492 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 DNMT3LQ9UJW3 386 aa8.16□□□□□ -1.1
TPM4-210ENST00000588507 LRRK2Q5S007 2527 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 FANCIQ9NVI1 1328 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 CYP2D7A0A087X1C5 515 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 A0A1B0GTL3 188 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 UPK3BL1B0FP48 263 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 UPK3BL2E5RIL1 263 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 RHOBTB1O94844 696 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 LGALS2P05162 132 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 MRPS6P82932 125 aaKnown RBP8.15□□□□□ -1.1
TPM4-210ENST00000588507 HNRNPDQ14103 355 aaKnown RBP8.15□□□□□ -1.1
TPM4-210ENST00000588507 LY6DQ14210 128 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 PLK5Q496M5 336 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 LRRC69Q6ZNQ3 347 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 SLC24A5Q71RS6 500 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 LRRC43Q8N309 656 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 DNAJB3Q8WWF6 145 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 CLEC4DQ8WXI8 215 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 TMX1Q9H3N1 280 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 TMEM161AQ9NX61 479 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 CDH7Q9ULB5 785 aa8.15□□□□□ -1.1
TPM4-210ENST00000588507 COL5A1P20908 1838 aaPredicted RBP8.15□□□□□ -1.11
TPM4-210ENST00000588507 TSC2P49815 1807 aa8.15□□□□□ -1.11
TPM4-210ENST00000588507 CCDC163A0A0D9SF12 145 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 NT5C1B-RDH14C9J2C7 533 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 HOXA2O43364 376 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 SORBS3O60504 671 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 CHRNB1P11230 501 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 FSHRP23945 695 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 IL12RB1P42701 662 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 SLC1A4P43007 532 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 METAP2P50579 478 aaKnown RBP eCLIP8.14□□□□□ -1.11
TPM4-210ENST00000588507 FAM193AP78312 1265 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 SEMA3BQ13214 749 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 UBAP2LQ14157 1087 aaKnown RBP8.14□□□□□ -1.11
TPM4-210ENST00000588507 ELF2Q15723 593 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 CELF3Q5SZQ8 465 aaKnown RBP8.14□□□□□ -1.11
TPM4-210ENST00000588507 IER5Q5VY09 327 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 DDX53Q86TM3 631 aaKnown RBP8.14□□□□□ -1.11
TPM4-210ENST00000588507 FMNL3Q8IVF7 1028 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 FAM3CQ92520 227 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 ZNF707Q96C28 371 aaPredicted RBP8.14□□□□□ -1.11
TPM4-210ENST00000588507 ZNF512BQ96KM6 892 aaPredicted RBP8.14□□□□□ -1.11
TPM4-210ENST00000588507 CASD1Q96PB1 797 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 KXD1Q9BQD3 176 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 DUSP15Q9H1R2 295 aaPredicted RBP8.14□□□□□ -1.11
TPM4-210ENST00000588507 RGS18Q9NS28 235 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 LAMA1P25391 3075 aa8.14□□□□□ -1.11
TPM4-210ENST00000588507 DENND3A2RUS2 1198 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 C9IYK1 514 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 RFPL2O75678 378 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 GGPS1O95749 300 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 RPLP2P05387 115 aaKnown RBP8.13□□□□□ -1.11
TPM4-210ENST00000588507 CNPP09543 421 aaKnown RBP8.13□□□□□ -1.11
TPM4-210ENST00000588507 ADSSP30520 456 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 IRX4P78413 519 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
TPM4-210ENST00000588507 PTGDRQ13258 359 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 PDXDC1Q6P996 788 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 PRICKLE2Q7Z3G6 844 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms