RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NFKBIZQ9BYH8 718 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 GCOM2Q9BZD3 368 aaPredicted RBP10.06□□□□□ -0.8
CIRBP-218ENST00000588344 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 BLOC1S4Q9NUP1 217 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 HPSEQ9Y251 543 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 TRPV2Q9Y5S1 764 aa10.06□□□□□ -0.8
CIRBP-218ENST00000588344 A0A087WWV3 80 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 H0YCG3 227 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 GPR182O15218 404 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 USO1O60763 962 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 EFCAB14O75071 495 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 GPR32O75388 356 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 CHRNA1P02708 482 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 CXCL10P02778 98 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 ACTN1P12814 892 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 PFKFB1P16118 471 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 EIF4BP23588 611 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 PHKA2P46019 1235 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 GPC3P51654 580 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 EFNA5P52803 228 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 SMTNP53814 917 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 CCL23P55773 120 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 NLRP11P59045 1033 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 UBE2HP62256 183 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 FPGSQ05932 587 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 MGAT3Q09327 533 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 LAMTOR4Q0VGL1 99 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 MCM6Q14566 821 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 FAM102BQ5T8I3 360 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 SRGAP1Q7Z6B7 1085 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 RHPN2Q8IUC4 686 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 PDILTQ8N807 584 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 SLC17A8Q8NDX2 589 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 APBB2Q92870 758 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 BADQ92934 168 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 TMEM143Q96AN5 459 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 NTPCRQ9BSD7 190 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 PANK2Q9BZ23 570 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 PPP1R12CQ9BZL4 782 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 MTIF3Q9H2K0 278 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 GDPD2Q9HCC8 539 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 IL23AQ9NPF7 189 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 KBTBD4Q9NVX7 518 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 RNF216Q9NWF9 866 aaPredicted RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 HOOK1Q9UJC3 728 aaKnown RBP10.05□□□□□ -0.8
CIRBP-218ENST00000588344 CDY2AQ9Y6F7 541 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 FRMPD3Q5JV73 1810 aa10.05□□□□□ -0.8
CIRBP-218ENST00000588344 A0A1B0GVL5 298 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 H0YGN5 161 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 VTNP04004 478 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 SYN1P17600 705 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 BMP8BP34820 402 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 NAMPTP43490 491 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 NDUFA8P51970 172 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 E2F4Q16254 413 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 KIZQ2M2Z5 673 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 NAALADL2Q58DX5 795 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 CNNM4Q6P4Q7 775 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 PSRC1Q6PGN9 363 aaPredicted RBP10.04□□□□□ -0.8
CIRBP-218ENST00000588344 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 GPBP1Q86WP2 473 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
CIRBP-218ENST00000588344 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 SEPT8Q92599 483 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 WNT8BQ93098 351 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 DHX58Q96C10 678 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 ZBTB10Q96DT7 871 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 FTHL17Q9BXU8 183 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 POLR3FQ9H1D9 316 aaPredicted RBP10.04□□□□□ -0.8
CIRBP-218ENST00000588344 WNT8AQ9H1J5 351 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 C2orf40Q9H1Z8 148 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 ADAMTS10Q9H324 1103 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 XPNPEP1Q9NQW7 623 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 SEL1LQ9UBV2 794 aa10.04□□□□□ -0.8
CIRBP-218ENST00000588344 ZMYND8Q9ULU4 1186 aaPredicted RBP10.04□□□□□ -0.8
CIRBP-218ENST00000588344 HIP1RO75146 1068 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 TBCAO75347 108 aaKnown RBP10.03□□□□□ -0.8
CIRBP-218ENST00000588344 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 BAIAP3O94812 1187 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 ZNF202O95125 648 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 FGBP02675 491 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 CTSHP09668 335 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 SRGAP2CP0DJJ0 459 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 MAPTP10636 758 aaKnown RBP10.03□□□□□ -0.8
CIRBP-218ENST00000588344 PLS3P13797 630 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 DARSP14868 501 aaKnown RBP10.03□□□□□ -0.8
CIRBP-218ENST00000588344 CSF2RAP15509 400 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 GAP43P17677 238 aa10.03□□□□□ -0.8
CIRBP-218ENST00000588344 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
CIRBP-218ENST00000588344 GLRA2P23416 452 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms