RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 HAS3O00219 553 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 IKBKBO14920 756 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 PRPF6O94906 941 aaKnown RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 GCNT3O95395 438 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 C22orf31O95567 290 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 HOXD13P35453 343 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 ARL2P36404 184 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 MRE11P49959 708 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 PEX3P56589 373 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 MYL5Q02045 173 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 STIM1Q13586 685 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 KIAA0753Q2KHM9 967 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 ZC2HC1CQ53FD0 456 aaPredicted RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 KSR1Q8IVT5 923 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 NELFCDQ8IXH7 590 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 MYOCDQ8IZQ8 938 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 KLHDC9Q8NEP7 349 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 ENOX1Q8TC92 643 aaKnown RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 ASAP3Q8TDY4 903 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 KIFAP3Q92845 792 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 P2RX5Q93086 422 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 HSD3B7Q9H2F3 369 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
VMP1-207ENST00000588131 RWDD2AQ9UIY3 292 aa12.49□□□□□ -0.41
VMP1-207ENST00000588131 BECN2A8MW95 431 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 K7ENM7 598 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 PSMA7O14818 248 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 PPP1R37O75864 691 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 SMIM10L2AP0DMW4 78 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 SMIM10L2BP0DMW5 78 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 GLRA2P23416 452 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 CCNE1P24864 410 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 PPP1R2P41236 205 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 RTP1P59025 263 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 KCNA1Q09470 495 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 HIC1Q14526 733 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 GRIK4Q16099 956 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 BMT2Q1RMZ1 405 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 GNASQ5JWF2 1037 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 MARCH8Q5T0T0 291 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 LHX8Q68G74 356 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 CCSAPQ6IQ19 270 aaPredicted RBP12.48□□□□□ -0.41
VMP1-207ENST00000588131 CXCL17Q6UXB2 119 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 ZNF507Q8TCN5 953 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
VMP1-207ENST00000588131 KIFC3Q9BVG8 833 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 STRA6Q9BX79 667 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 SPC25Q9HBM1 224 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
VMP1-207ENST00000588131 SETD4Q9NVD3 440 aa12.48□□□□□ -0.41
VMP1-207ENST00000588131 ZMYM2Q9UBW7 1377 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 ADGRA3Q8IWK6 1321 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 SIP14410 1827 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 CCDC169A6NNP5 214 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 SMTNL1A8MU46 457 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
VMP1-207ENST00000588131 SLC16A4O15374 487 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 AP5Z1O43299 807 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 KPNA6O60684 536 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 HSPA1AP0DMV8 641 aaKnown RBP12.47□□□□□ -0.41
VMP1-207ENST00000588131 HSPA1BP0DMV9 641 aaKnown RBP12.47□□□□□ -0.41
VMP1-207ENST00000588131 MAPTP10636 758 aaKnown RBP12.47□□□□□ -0.41
VMP1-207ENST00000588131 KLRC1P26715 233 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 CST5P28325 142 aaPredicted RBP12.47□□□□□ -0.41
VMP1-207ENST00000588131 NPTX2P47972 431 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 CLCN3P51790 818 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 DMP1Q13316 513 aaPredicted RBP12.47□□□□□ -0.41
VMP1-207ENST00000588131 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 SPATA1Q5VX52 437 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 CENPPQ6IPU0 288 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 TTI2Q6NXR4 508 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 MTHFD1LQ6UB35 978 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 SPIRE2Q8WWL2 714 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
VMP1-207ENST00000588131 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.47□□□□□ -0.41
VMP1-207ENST00000588131 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 IKZF4Q9H2S9 585 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 KCTD10Q9H3F6 313 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 KMT5AQ9NQR1 393 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 550.2 ms