RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CDCA3Q99618 268 aaPredicted RBP17.71■□□□□ 0.43
NCLN-203ENST00000587740 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
NCLN-203ENST00000587740 BRMS1Q9HCU9 246 aa17.71■□□□□ 0.43
NCLN-203ENST00000587740 KCNH7Q9NS40 1196 aa17.71■□□□□ 0.43
NCLN-203ENST00000587740 GJB4Q9NTQ9 266 aa17.71■□□□□ 0.43
NCLN-203ENST00000587740 TYW1Q9NV66 732 aaKnown RBP17.71■□□□□ 0.43
NCLN-203ENST00000587740 NOC2LQ9Y3T9 749 aaKnown RBP17.71■□□□□ 0.43
NCLN-203ENST00000587740 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
NCLN-203ENST00000587740 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
NCLN-203ENST00000587740 PCDHB7Q9Y5E2 793 aa17.71■□□□□ 0.43
NCLN-203ENST00000587740 DMDP11532 3685 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 C9IYK1 514 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 H0Y858 1186 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 MAFGO15525 162 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 SREBF1P36956 1147 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 FOSBP53539 338 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 ACTR2P61160 394 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
NCLN-203ENST00000587740 PLPPR4Q7Z2D5 763 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 NME8Q8N427 588 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 ATOH1Q92858 354 aaPredicted RBP17.7■□□□□ 0.42
NCLN-203ENST00000587740 SNX21Q969T3 373 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 ADAM2Q99965 735 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 APOL5Q9BWW9 433 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 CWH43Q9H720 699 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 RGS18Q9NS28 235 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 CDH22Q9UJ99 828 aa17.7■□□□□ 0.42
NCLN-203ENST00000587740 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
NCLN-203ENST00000587740 ARP10275 920 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 SP100P23497 879 aaPredicted RBP17.69■□□□□ 0.42
NCLN-203ENST00000587740 KLRC1P26715 233 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 ZNF76P36508 570 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 STAT5BP51692 787 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 NPY5RQ15761 445 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 ANKRD54Q6NXT1 300 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 HSCBQ8IWL3 235 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 KIAA0319LQ8IZA0 1049 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 MXRA8Q9BRK3 442 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
NCLN-203ENST00000587740 HIDE1A8MVS5 230 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 M0R2N6 131 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 ATG7O95352 703 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 FGFR1P11362 822 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 GJB2P29033 226 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 KRT2P35908 639 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 TECP42680 631 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 ITGB3BPQ13352 177 aaPredicted RBP17.68■□□□□ 0.42
NCLN-203ENST00000587740 CUL4AQ13619 759 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 PLPP4Q5VZY2 271 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 SLC24A5Q71RS6 500 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 THNSL1Q8IYQ7 743 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 RIPOR3Q96MK2 946 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 AAASQ9NRG9 546 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 ST3GAL5Q9UNP4 418 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 NFASCO94856 1347 aa17.68■□□□□ 0.42
NCLN-203ENST00000587740 IGKV6D-21A0A0A0MT36 114 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 CCDC194A0A1B0GVG4 234 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 DENND3A2RUS2 1198 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 RPS6KA5O75582 802 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 CYP3A4P08684 503 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 FAM189BP81408 668 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
NCLN-203ENST00000587740 SAFBQ15424 915 aaKnown RBP eCLIP17.67■□□□□ 0.42
NCLN-203ENST00000587740 PDE12Q6L8Q7 609 aaKnown RBP17.67■□□□□ 0.42
NCLN-203ENST00000587740 LLGL2Q6P1M3 1020 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 MRPS27Q92552 414 aaKnown RBP17.67■□□□□ 0.42
NCLN-203ENST00000587740 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
NCLN-203ENST00000587740 C1orf112Q9NSG2 853 aa17.67■□□□□ 0.42
NCLN-203ENST00000587740 FSD2A1L4K1 749 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 PROB1E7EW31 1015 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 CCNE2O96020 404 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 PLCB3Q01970 1234 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 GUCY1B3Q02153 619 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 ASCL5Q7RTU5 278 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 OXER1Q8TDS5 423 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 TBCKQ8TEA7 893 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 PPP1R16BQ96T49 567 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 TCF25Q9BQ70 676 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 IRF2BPLQ9H1B7 796 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 AGO4Q9HCK5 861 aaKnown RBP17.66■□□□□ 0.42
NCLN-203ENST00000587740 RNF19AQ9NV58 838 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 LZTS1Q9Y250 596 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 DCHS1Q96JQ0 3298 aa17.66■□□□□ 0.42
NCLN-203ENST00000587740 ZBTB42B2RXF5 422 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 GALR2O43603 387 aaPredicted RBP17.65■□□□□ 0.42
NCLN-203ENST00000587740 HBP1O60381 514 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 BRD1O95696 1058 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 ATP4AP20648 1035 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 USP11P51784 963 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 DSC3Q14574 896 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 ZBTB33Q86T24 672 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
NCLN-203ENST00000587740 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
NCLN-203ENST00000587740 KREMEN2Q8NCW0 462 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms