RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 TFDP1Q14186 410 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 PCBP1Q15365 356 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 STX1AQ16623 288 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 ZNF658Q5TYW1 1059 aaPredicted RBP11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 PLA2G4FQ68DD2 849 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 RSPH3Q86UC2 560 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 LRRC15Q8TF66 581 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 PSPC1Q8WXF1 523 aaKnown RBP11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 NTPCRQ9BSD7 190 aaKnown RBP11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 C2orf40Q9H1Z8 148 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 TELO2Q9Y4R8 837 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 PCDHA2Q9Y5H9 948 aa11.45□□□□□ -0.58
CLPTM1-207ENST00000587537 MYADML2A6NDP7 307 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 ZBTB39O15060 712 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 EIF3DO15371 548 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 KLRC4O43908 158 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 HIP1RO75146 1068 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 KLRC1P26715 233 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 NAMPTP43490 491 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 EFNA5P52803 228 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 NLRP12P59046 1061 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 ADAM17P78536 824 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 MORC3Q14149 939 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 HERC4Q5GLZ8 1057 aaPredicted RBP11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 FAM26FQ5R3K3 315 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 FAM102BQ5T8I3 360 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 C1orf53Q5VUE5 145 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 MTHFD1LQ6UB35 978 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 CXCL17Q6UXB2 119 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 DYMQ7RTS9 669 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 RPAINQ86UA6 219 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 SLC43A3Q8NBI5 491 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 NFKBIZQ9BYH8 718 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 STARD7Q9NQZ5 370 aa11.44□□□□□ -0.58
CLPTM1-207ENST00000587537 A0A1W2PQ45 241 aaPredicted RBP11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 A0A1W2PQY0 241 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 TFRCP02786 760 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 ARL2P36404 184 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 SNRPFP62306 86 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 COASYQ13057 564 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 ITGA7Q13683 1181 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 MTFR1Q15390 333 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 KMT5BQ4FZB7 885 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 EFCAB12Q6NXP0 572 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 LRSAM1Q6UWE0 723 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 ZNF410Q86VK4 478 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 GRAMD1CQ8IYS0 662 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 MYCT1Q8N699 235 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 GOLGA5Q8TBA6 731 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 LMBR1Q8WVP7 490 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 STAMQ92783 540 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 VTI1AQ96AJ9 217 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 INO80BQ9C086 356 aaPredicted RBP11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 MCOLN1Q9GZU1 580 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 BLZF1Q9H2G9 400 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 XPNPEP1Q9NQW7 623 aa11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-207ENST00000587537 BICDL2A1A5D9 508 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 SYCE3A1L190 88 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 M0QZ92 97 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 ARVCFO00192 962 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 PSMA7O14818 248 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 ERCC5P28715 1186 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 NCKAP1LP55160 1127 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 TYRO3Q06418 890 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 MAPK7Q13164 816 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 PTK7Q13308 1070 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 BMT2Q1RMZ1 405 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 TRMT1LQ7Z2T5 733 aaKnown RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 ZBTB8OSQ8IWT0 167 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 METTL13Q8N6R0 699 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 LINC01465Q8N7H1 131 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 DHTKD1Q96HY7 919 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 BPIFA3Q9BQP9 254 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 POLR3FQ9H1D9 316 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 ZHX3Q9H4I2 956 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 TMEM206Q9H813 350 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 MRPL44Q9H9J2 332 aaKnown RBP11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 SETD4Q9NVD3 440 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 HDAC6Q9UBN7 1215 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 MAN1B1Q9UKM7 699 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 EXOC7Q9UPT5 735 aa11.42□□□□□ -0.58
CLPTM1-207ENST00000587537 TMEM150BA6NC51 233 aa11.41□□□□□ -0.58
CLPTM1-207ENST00000587537 TLR3O15455 904 aaKnown RBP11.41□□□□□ -0.58
CLPTM1-207ENST00000587537 CYP2C9P11712 490 aa11.41□□□□□ -0.58
CLPTM1-207ENST00000587537 PTGS1P23219 599 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms