RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ZSCAN20P17040 1043 aaPredicted RBP16.37■□□□□ 0.21
SDF2-202ENST00000585428 USP11P51784 963 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 NTRK3Q16288 839 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 Q6ZUG5 572 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 PRSS33Q8NF86 280 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 FAM167AQ96KS9 214 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 TCF25Q9BQ70 676 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 DISC1Q9NRI5 854 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 TECTAO75443 2155 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 PIEZO1Q92508 2521 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 MSH4O15457 936 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 EOMESO95936 686 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
SDF2-202ENST00000585428 HOXB8P17481 243 aaPredicted RBP16.36■□□□□ 0.21
SDF2-202ENST00000585428 TECP42680 631 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 KRT17Q04695 432 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 SIGLEC14Q08ET2 396 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 TARBP2Q15633 366 aaKnown RBP16.36■□□□□ 0.21
SDF2-202ENST00000585428 PLPP4Q5VZY2 271 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 ZNF598Q86UK7 904 aaKnown RBP16.36■□□□□ 0.21
SDF2-202ENST00000585428 LRRC71Q8N4P6 559 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 FBXL6Q8N531 539 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 MRPL43Q8N983 215 aaKnown RBP16.36■□□□□ 0.21
SDF2-202ENST00000585428 BRF1Q92994 677 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 PHOX2BQ99453 314 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 RIT2Q99578 217 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 PRRX2Q99811 253 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 SPG21Q9NZD8 308 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 AKT3Q9Y243 479 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 SAMM50Q9Y512 469 aa16.36■□□□□ 0.21
SDF2-202ENST00000585428 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 OATP04181 439 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 GPC3P51654 580 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 CLLU1OSQ5K130 101 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 BICD2Q8TD16 824 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 PHKBQ93100 1093 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 ZNF558Q96NG5 402 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 NIFKQ9BYG3 293 aaKnown RBP16.35■□□□□ 0.21
SDF2-202ENST00000585428 NAP1L2Q9ULW6 460 aaPredicted RBP16.35■□□□□ 0.21
SDF2-202ENST00000585428 KIAA1671Q9BY89 1806 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 NID2Q14112 1375 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
SDF2-202ENST00000585428 FNDC1Q4ZHG4 1894 aaPredicted RBP16.34■□□□□ 0.21
SDF2-202ENST00000585428 PLXNA4Q9HCM2 1894 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 STBD1O95210 358 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 SRGAP2BP0DMP2 458 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 PPM1AP35813 382 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 PBX3P40426 434 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 EVCP57679 992 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 FGD1P98174 961 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 TCF15Q12870 199 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 UGCGQ16739 394 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 TMC7Q7Z402 723 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 SLC39A11Q8N1S5 342 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 LRRC43Q8N309 656 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 SLC5A5Q92911 643 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 ZNF668Q96K58 619 aaPredicted RBP16.34■□□□□ 0.21
SDF2-202ENST00000585428 TRAIPQ9BWF2 469 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 ENTPD7Q9NQZ7 604 aa16.34■□□□□ 0.21
SDF2-202ENST00000585428 C2orf71A6NGG8 1288 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 CDC45O75419 566 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 PSMD10O75832 226 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 IFNAR1P17181 557 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 SFNP31947 248 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 HSPA4P34932 840 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 PTPN5P54829 565 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 CDC42EP1Q00587 391 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
SDF2-202ENST00000585428 ABI1Q8IZP0 508 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
SDF2-202ENST00000585428 ADAM7Q9H2U9 754 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 SH3GLB2Q9NR46 395 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 CHST12Q9NRB3 414 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 SNX14Q9Y5W7 946 aa16.33■□□□□ 0.2
SDF2-202ENST00000585428 IGKV6-21A0A0C4DH24 114 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
SDF2-202ENST00000585428 FGFR4P22455 802 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
SDF2-202ENST00000585428 AVPR2P30518 371 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
SDF2-202ENST00000585428 PRKCEQ02156 737 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 DRP2Q13474 957 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 Q4G0T1 1027 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 ZNF318Q5VUA4 2279 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 HELQQ8TDG4 1101 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 CASP10Q92851 521 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 GJA10Q969M2 543 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 JAKMIP1Q96N16 626 aaKnown RBP16.32■□□□□ 0.2
SDF2-202ENST00000585428 APOL5Q9BWW9 433 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 UNC45AQ9H3U1 944 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 DACT1Q9NYF0 836 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms