RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SFNP31947 248 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SP4Q02446 784 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SYT2Q8N9I0 419 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EPC1Q9H2F5 836 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 VIPAS39Q9H9C1 493 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SLC9A2Q9UBY0 812 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 REXO2Q9Y3B8 237 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 RASSF10A6NK89 507 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 APLP1P51693 650 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NOGQ13253 232 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CCDC122Q5T0U0 273 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 IQCEQ6IPM2 695 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ARMCX2Q7L311 632 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CYFIP1Q7L576 1253 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 FBXO16Q8IX29 292 aaPredicted RBP16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 RUBCNQ92622 972 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CAPNS2Q96L46 248 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NACC1Q96RE7 527 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ST7Q9NRC1 585 aa16.46■□□□□ 0.22
CDK5RAP3-236ENST00000584991 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CA12O43570 354 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CYP11B2P19099 503 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 QARSP47897 775 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 LRRC63Q05C16 580 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 UNC13DQ70J99 1090 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 GUF1Q8N442 669 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CNOT6LQ96LI5 555 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 BMP2KQ9NSY1 1161 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 LOXHD1Q8IVV2 1947 aa16.45■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NPHP3-ACAD11A0A0J9YXS1 232 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TGFB3P10600 412 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 IDEP14735 1019 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PRLRP16471 622 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ITIH3Q06033 890 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 LY6KQ17RY6 165 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ARSHQ5FYA8 562 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 KIAA1328Q86T90 577 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 DNAJC19Q96DA6 116 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NOC4LQ9BVI4 516 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 GUCA1BQ9UMX6 200 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ZNF236Q9UL36 1845 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ARIH2O95376 493 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MTIF2P46199 727 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ACTR2P61160 394 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 RAD51AP2Q09MP3 1159 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 STK4Q13043 487 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 UGCGQ16739 394 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MIIPQ5JXC2 388 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MAML3Q96JK9 1138 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NHEJ1Q9H9Q4 299 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MED4Q9NPJ6 270 aa16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 DIS3Q9Y2L1 958 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-236ENST00000584991 LCA5LO95447 670 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PSAPP07602 524 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PSMC5P62195 406 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 KIF5AQ12840 1032 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NEDD9Q14511 834 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MORN1Q5T089 497 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 KCNV1Q6PIU1 500 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NPLOC4Q8TAT6 608 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 JAKMIP2Q96AA8 810 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PNKPQ96T60 521 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MYH9P35579 1960 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MYH10P35580 1976 aa16.43■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 USO1O60763 962 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 FARP2O94887 1054 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 GGPS1O95749 300 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 VAV2P52735 878 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SPA17Q15506 151 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SWSAP1Q6NVH7 229 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ABHD15Q6UXT9 468 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 HPS3Q969F9 1004 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 RUSC1Q9BVN2 902 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ABCB6Q9NP58 842 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 PANK4Q9NVE7 773 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 GABBR1Q9UBS5 961 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms