RNA–Protein interactions for RNA: ENST00000584866.1

NDEL1-218, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-218ENST00000584866 DHX33Q9H6R0 707 aaKnown RBP22.02■■□□□ 1.12
NDEL1-218ENST00000584866 SUCLA2Q9P2R7 463 aaPredicted RBP22.02■■□□□ 1.12
NDEL1-218ENST00000584866 ADGRA3Q8IWK6 1321 aa22.02■■□□□ 1.12
NDEL1-218ENST00000584866 PRRC2BQ5JSZ5 2229 aaKnown RBP22.02■■□□□ 1.11
NDEL1-218ENST00000584866 C9IYK1 514 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 LYPLA2O95372 231 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 STAG3L1P0CL83 205 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 TRAPPC10P48553 1259 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 DNM2P50570 870 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 FAM189BP81408 668 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 SLC24A5Q71RS6 500 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 OTUD6AQ7L8S5 288 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 MICALL1Q8N3F8 863 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 C1orf112Q9NSG2 853 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 A0A0C4DFX4 3053 aa22.01■■□□□ 1.11
NDEL1-218ENST00000584866 COL4A4P53420 1690 aaPredicted RBP22.01■■□□□ 1.11
NDEL1-218ENST00000584866 DENND3A2RUS2 1198 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 GNL2Q13823 731 aaKnown RBP22■■□□□ 1.11
NDEL1-218ENST00000584866 BTG3Q14201 252 aaPredicted RBP22■■□□□ 1.11
NDEL1-218ENST00000584866 TTC38Q5R3I4 469 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 EXOC8Q8IYI6 725 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 C4orf32Q8N8J7 132 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 NEK9Q8TD19 979 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 NLRP7Q8WX94 980 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 CLP1Q92989 425 aaKnown RBP22■■□□□ 1.11
NDEL1-218ENST00000584866 KIF3AQ9Y496 699 aa22■■□□□ 1.11
NDEL1-218ENST00000584866 A0A087WZ62 844 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 POTEMA6NI47 508 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 H3BNC9 293 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 FGFR4P22455 802 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 GJB2P29033 226 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 RFC5P40937 340 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 TOB1P50616 345 aaPredicted RBP21.99■■□□□ 1.11
NDEL1-218ENST00000584866 XKR9Q5GH70 373 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 ZNF410Q86VK4 478 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 RHPN2Q8IUC4 686 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 KSR1Q8IVT5 923 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 CMTR2Q8IYT2 770 aaKnown RBP21.99■■□□□ 1.11
NDEL1-218ENST00000584866 FDXACB1Q9BRP7 624 aaPredicted RBP21.99■■□□□ 1.11
NDEL1-218ENST00000584866 GCOM2Q9BZD3 368 aaPredicted RBP21.99■■□□□ 1.11
NDEL1-218ENST00000584866 LRFN2Q9ULH4 789 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 PCDHB7Q9Y5E2 793 aa21.99■■□□□ 1.11
NDEL1-218ENST00000584866 REV3LO60673 3130 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 CSDE1O75534 798 aaKnown RBP21.98■■□□□ 1.11
NDEL1-218ENST00000584866 OR52Z1P0C646 297 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 SPATA31C1P0DKV0 1188 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 BMPR1AP36894 532 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 TECP42680 631 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 GATMP50440 423 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 POLGP54098 1239 aaPredicted RBP21.98■■□□□ 1.11
NDEL1-218ENST00000584866 NBR1Q14596 966 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 SLC7A3Q8WY07 619 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 SCLT1Q96NL6 688 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 ANKEF1Q9NU02 776 aa21.98■■□□□ 1.11
NDEL1-218ENST00000584866 NOL7Q9UMY1 257 aaKnown RBP21.98■■□□□ 1.11
NDEL1-218ENST00000584866 C5orf67F2Z3F1 127 aa21.97■■□□□ 1.11
NDEL1-218ENST00000584866 RB1P06400 928 aa21.97■■□□□ 1.11
NDEL1-218ENST00000584866 IBSPP21815 317 aaPredicted RBP21.97■■□□□ 1.11
NDEL1-218ENST00000584866 GPM6BQ13491 265 aa21.97■■□□□ 1.11
NDEL1-218ENST00000584866 PRPF31Q8WWY3 499 aaKnown RBP21.97■■□□□ 1.11
NDEL1-218ENST00000584866 TMEM143Q96AN5 459 aa21.97■■□□□ 1.11
NDEL1-218ENST00000584866 ELAC1Q9H777 363 aaKnown RBP21.97■■□□□ 1.11
NDEL1-218ENST00000584866 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
NDEL1-218ENST00000584866 COL4A3BPQ9Y5P4 624 aa21.97■■□□□ 1.11
NDEL1-218ENST00000584866 MRPL42Q9Y6G3 142 aaKnown RBP21.97■■□□□ 1.11
NDEL1-218ENST00000584866 RALGAPA2Q2PPJ7 1873 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 NLRC5Q86WI3 1866 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 XRCC6P12956 609 aaKnown RBP eCLIP21.96■■□□□ 1.11
NDEL1-218ENST00000584866 ZSCAN20P17040 1043 aaPredicted RBP21.96■■□□□ 1.11
NDEL1-218ENST00000584866 EMC2Q15006 297 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 FAM102BQ5T8I3 360 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 CATSPER3Q86XQ3 398 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 IFT122Q9HBG6 1241 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 XPNPEP1Q9NQW7 623 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 BMP2KQ9NSY1 1161 aaPredicted RBP21.96■■□□□ 1.11
NDEL1-218ENST00000584866 TMEM161AQ9NX61 479 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 RWDD3Q9Y3V2 267 aa21.96■■□□□ 1.11
NDEL1-218ENST00000584866 VCANP13611 3396 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 A0A087WWV3 80 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 GAS2O43903 313 aaKnown RBP21.95■■□□□ 1.1
NDEL1-218ENST00000584866 MED24O75448 989 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 CTNNB1P35222 781 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 PAN2Q504Q3 1202 aaKnown RBP21.95■■□□□ 1.1
NDEL1-218ENST00000584866 PIGOQ8TEQ8 1089 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 PSPC1Q8WXF1 523 aaKnown RBP21.95■■□□□ 1.1
NDEL1-218ENST00000584866 NLRP4Q96MN2 994 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 POLR3CQ9BUI4 534 aaPredicted RBP21.95■■□□□ 1.1
NDEL1-218ENST00000584866 INO80BQ9C086 356 aaPredicted RBP21.95■■□□□ 1.1
NDEL1-218ENST00000584866 ATP6V0A4Q9HBG4 840 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 TUFT1Q9NNX1 390 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 THEGQ9P2T0 379 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 SMC3Q9UQE7 1217 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 PCDHB6Q9Y5E3 794 aa21.95■■□□□ 1.1
NDEL1-218ENST00000584866 RARRES1P49788 294 aa21.94■■□□□ 1.1
NDEL1-218ENST00000584866 LAMTOR4Q0VGL1 99 aa21.94■■□□□ 1.1
NDEL1-218ENST00000584866 CUL4AQ13619 759 aa21.94■■□□□ 1.1
NDEL1-218ENST00000584866 FERMT3Q86UX7 667 aa21.94■■□□□ 1.1
NDEL1-218ENST00000584866 ECHDC2Q86YB7 292 aa21.94■■□□□ 1.1
NDEL1-218ENST00000584866 ATXN2LQ8WWM7 1075 aaKnown RBP21.94■■□□□ 1.1
NDEL1-218ENST00000584866 TCP11Q8WWU5 503 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms