RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 NCK2O43639 380 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 SERPINB2P05120 415 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 PPARGP37231 505 aaPredicted RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 PFKFB3Q16875 520 aaPredicted RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 USP17L2Q6R6M4 530 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 GUF1Q8N442 669 aaKnown RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 STRBPQ96SI9 672 aaKnown RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 SYF2O95926 243 aaKnown RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 KRT4P19013 534 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 RAD54LQ92698 747 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 CCT8L2Q96SF2 557 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 DHX36Q9H2U1 1008 aaKnown RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 ARHGAP26Q9UNA1 814 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 TRAF3IP3Q9Y228 551 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 ARHGEF37A1IGU5 675 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 TCP10L2B9ZVM9 353 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 F8W8V4 182 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 H3BRJ5 948 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 SORBS3O60504 671 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 HNRNPCP07910 306 aaKnown RBP eCLIP13.92□□□□□ -0.184e-8■■□□□ 11.8
RNF43-208ENST00000584437 TMC4Q7Z404 712 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 ZNF564Q8TBZ8 553 aaPredicted RBP13.92□□□□□ -0.18
RNF43-208ENST00000584437 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 UBAP1LF5GYI3 381 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 PMLP29590 882 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 CCND2P30279 289 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 SLC16A2P36021 539 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 UBXN2AP68543 259 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 CCDC137Q6PK04 289 aaKnown RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 RFFLQ8WZ73 363 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 CFAP69A5D8W1 941 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 PSAPP07602 524 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 MYBL1P10243 752 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 KLC1Q07866 573 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 SLC30A9Q6PML9 568 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 NUDCD3Q8IVD9 361 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 STAG2Q8N3U4 1231 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 ASNSD1Q9NWL6 643 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 TSTA3Q13630 321 aaPredicted RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 MAPRE2Q15555 327 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 XXYLT1Q8NBI6 393 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 HSPH1Q92598 858 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 HEMGNQ9BXL5 484 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 MLXIPLQ9NP71 852 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 CCZ1BP86790 482 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 CCZ1P86791 482 aaPredicted RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 UBE2SQ16763 222 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 HEXIM2Q96MH2 286 aaKnown RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 DONSONQ9NYP3 566 aa13.91□□□□□ -0.18
RNF43-208ENST00000584437 STX18Q9P2W9 335 aaKnown RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 ADD3Q9UEY8 706 aaKnown RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 SMG5Q9UPR3 1016 aaKnown RBP13.91□□□□□ -0.18
RNF43-208ENST00000584437 EFTUD2Q15029 972 aaKnown RBP eCLIP13.9□□□□□ -0.186e-8■■■■□ 23.1
RNF43-208ENST00000584437 E4F1Q66K89 784 aaPredicted RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 PI16Q6UXB8 463 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 C7orf31Q8N865 590 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 SLC26A7Q8TE54 656 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 CCND1P24385 295 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 ANXA13P27216 316 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 AP1B1Q10567 949 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 PRKG1Q13976 671 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 KIF22Q14807 665 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 NCLNQ969V3 563 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 KCNF1Q9H3M0 494 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 PIH1D3Q9NQM4 214 aaKnown RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 SUFUQ9UMX1 484 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 PGM1P36871 562 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 AGBL2Q5U5Z8 902 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 PDXDC1Q6P996 788 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 MSTO1Q9BUK6 570 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 ASAP2O43150 1006 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 COASYQ13057 564 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 HIC1Q14526 733 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 LRRC14Q15048 493 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 SPOUT1Q5T280 376 aaKnown RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 RYBPQ8N488 228 aaPredicted RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.9□□□□□ -0.18
RNF43-208ENST00000584437 NUP85Q9BW27 656 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 VPS11Q9H270 941 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 AKT3Q9Y243 479 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 RASSF3Q86WH2 238 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 PPM1NQ8N819 430 aa13.9□□□□□ -0.18
RNF43-208ENST00000584437 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
RNF43-208ENST00000584437 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.19
RNF43-208ENST00000584437 ZBTB24O43167 697 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 DIAPH2O60879 1101 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms