RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-210	ENST00000584340	TMEM143	Q96AN5	459 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	PLIN2	Q99541	437 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	RAB34	Q9BZG1	259 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	MINDY3	Q9H8M7	445 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	SUGCT	Q9HAC7	445 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	POLD4	Q9HCU8	107 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	GPRC5C	Q9NQ84	441 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	PRKAG2	Q9UGJ0	569 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	NOC2L	Q9Y3T9	749 aa	Known RBP	11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	STK24	Q9Y6E0	443 aa		11.98	□□□□□ -0.49
PSMD11-210	ENST00000584340	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	CUTA	O60888	179 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	PARN	O95453	639 aa	Known RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	RPLP2	P05387	115 aa	Known RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	GLRA2	P23416	452 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	CRYBB1	P53674	252 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	NLRP11	P59045	1033 aa	Known RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	DSC3	Q14574	896 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	STK38	Q15208	465 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	IER5	Q5VY09	327 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	RESP18	Q5W5W9	173 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	DEFB128	Q7Z7B8	93 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	FAM228A	Q86W67	206 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	CCDC155	Q8N6L0	562 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	RETREG2	Q8NC44	543 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	KCNG4	Q8TDN1	519 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	ZNF668	Q96K58	619 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	ERVK-5	Q9HDB9	667 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	CFAP45	Q9UL16	551 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	HPSE	Q9Y251	543 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	TRPV2	Q9Y5S1	764 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	GBF1	Q92538	1859 aa		11.97	□□□□□ -0.49
PSMD11-210	ENST00000584340	ADGRA3	Q8IWK6	1321 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	MGEA5	O60502	916 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	CSDE1	O75534	798 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	PFKM	P08237	780 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	GHR	P10912	638 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	DARS	P14868	501 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	EIF4B	P23588	611 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	ANP32A	P39687	249 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	UBA7	P41226	1012 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	POU5F1B	Q06416	359 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	LAMTOR4	Q0VGL1	99 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	CAPS	Q13938	189 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	AMHR2	Q16671	573 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	ADAL	Q6DHV7	355 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	TSHZ1	Q6ZSZ6	1077 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	RAD54L	Q92698	747 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	IPO9	Q96P70	1041 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	FIZ1	Q96SL8	496 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	UBE2O	Q9C0C9	1292 aa	Known RBP	11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	GDPD2	Q9HCC8	539 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	PADI3	Q9ULW8	664 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	DNM3	Q9UQ16	869 aa		11.96	□□□□□ -0.49
PSMD11-210	ENST00000584340	MYH11	P35749	1972 aa		11.96	□□□□□ -0.5
PSMD11-210	ENST00000584340		A0A087WZ62	844 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340		A0A1W2PPC1	479 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	SOX1	O00570	391 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	GAS2	O43903	313 aa	Known RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	USO1	O60763	962 aa	Known RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	FGB	P02675	491 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	EDN1	P05305	212 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	PLA2G4B	P0C869	781 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	GUCY2C	P25092	1073 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	HOXA11	P31270	313 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	CD52	P31358	61 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	POLG	P54098	1239 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	PTEN	P60484	403 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	MCM6	Q14566	821 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	CNKSR3	Q6P9H4	555 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	2e-7	■■■■□ 22.4
PSMD11-210	ENST00000584340	CLEC17A	Q6ZS10	378 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	OTOP2	Q7RTS6	562 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	RPUSD2	Q8IZ73	545 aa	Known RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	TDH	Q8IZJ6	230 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	SLC7A3	Q8WY07	619 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	KCNN1	Q92952	543 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	DNAJC19	Q96DA6	116 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	PPP1R16B	Q96T49	567 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	OSMR	Q99650	979 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	NTPCR	Q9BSD7	190 aa	Known RBP	11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	NFKBIZ	Q9BYH8	718 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	PANK2	Q9BZ23	570 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	NT5C3A	Q9H0P0	336 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	ATP6V0A4	Q9HBG4	840 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	COL4A3BP	Q9Y5P4	624 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	TRANK1	O15050	2925 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	REV3L	O60673	3130 aa		11.95	□□□□□ -0.5
PSMD11-210	ENST00000584340	ARHGEF35	A5YM69	484 aa		11.94	□□□□□ -0.5
PSMD11-210	ENST00000584340	TTLL13P	A6NNM8	815 aa		11.94	□□□□□ -0.5
PSMD11-210	ENST00000584340	ENPP3	O14638	875 aa		11.94	□□□□□ -0.5
PSMD11-210	ENST00000584340	CMA1	P23946	247 aa		11.94	□□□□□ -0.5
PSMD11-210	ENST00000584340	TMOD1	P28289	359 aa		11.94	□□□□□ -0.5

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