RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 LRRC55Q6ZSA7 311 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 PLA2G4DQ86XP0 818 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 TMEM105Q8N8V8 129 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 TMEM169Q96HH4 297 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 PGBD1Q96JS3 809 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 DACT1Q9NYF0 836 aa15.15■□□□□ 0.02
COPS3-218ENST00000584216 DBR1Q9UK59 544 aaKnown RBP15.15■□□□□ 0.02
COPS3-218ENST00000584216 MAFBQ9Y5Q3 323 aaPredicted RBP15.15■□□□□ 0.02
COPS3-218ENST00000584216 SMCO2A6NFE2 343 aa15.14■□□□□ 0.01
COPS3-218ENST00000584216 CLASP2O75122 1294 aaKnown RBP15.14■□□□□ 0.01
COPS3-218ENST00000584216 EIF4BP23588 611 aaKnown RBP15.14■□□□□ 0.01
COPS3-218ENST00000584216 PBX3P40426 434 aa15.14■□□□□ 0.01
COPS3-218ENST00000584216 NLRP11P59045 1033 aaKnown RBP15.14■□□□□ 0.01
COPS3-218ENST00000584216 RNF169Q8NCN4 708 aa15.14■□□□□ 0.01
COPS3-218ENST00000584216 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
COPS3-218ENST00000584216 SCLT1Q96NL6 688 aa15.14■□□□□ 0.01
COPS3-218ENST00000584216 ZNF577Q9BSK1 485 aa15.14■□□□□ 0.01
COPS3-218ENST00000584216 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
COPS3-218ENST00000584216 ZFHX2Q9C0A1 2572 aaPredicted RBP15.14■□□□□ 0.01
COPS3-218ENST00000584216 CACNA1HO95180 2353 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
COPS3-218ENST00000584216 CXCL14O95715 111 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
COPS3-218ENST00000584216 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
COPS3-218ENST00000584216 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 RAB11FIP4Q86YS3 637 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 CFAP54Q96N23 3096 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 CYP26B1Q9NR63 512 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 RNF19AQ9NV58 838 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 BARHL2Q9NY43 387 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 STK39Q9UEW8 545 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 CNTNAP5Q8WYK1 1306 aa15.13■□□□□ 0.01
COPS3-218ENST00000584216 FAM86B1E9PN63 330 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 DHX15O43143 795 aaKnown RBP15.12■□□□□ 0.01
COPS3-218ENST00000584216 CYP3A4P08684 503 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 FAM86B2P0C5J1 330 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 ATP4AP20648 1035 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 CLK2P49760 499 aaKnown RBP15.12■□□□□ 0.01
COPS3-218ENST00000584216 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
COPS3-218ENST00000584216 CLCN3P51790 818 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 BCAR1P56945 870 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 CDC42EP1Q00587 391 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 CLLU1OSQ5K130 101 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 EFCAB12Q6NXP0 572 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 CABP7Q86V35 215 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 LIMD1Q9UGP4 676 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 CDH22Q9UJ99 828 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 SAMM50Q9Y512 469 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 IRAK3Q9Y616 596 aa15.12■□□□□ 0.01
COPS3-218ENST00000584216 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 SLC27A2O14975 620 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 ASGR2P07307 311 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 SKIP12755 728 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 DARSP14868 501 aaKnown RBP15.11■□□□□ 0.01
COPS3-218ENST00000584216 ID4P47928 161 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 RTN1Q16799 776 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 TYW1BQ6NUM6 668 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 APOA5Q6Q788 366 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 OTOP3Q7RTS5 596 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
COPS3-218ENST00000584216 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 FLCNQ8NFG4 579 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 HELQQ8TDG4 1101 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 RTP3Q9BQQ7 232 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 ADAMTS10Q9H324 1103 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 CHST12Q9NRB3 414 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 GABBR1Q9UBS5 961 aa15.11■□□□□ 0.01
COPS3-218ENST00000584216 V9GY48 417 aaPredicted RBP15.11■□□□□ 0.01
COPS3-218ENST00000584216 IGLV3-22A0A075B6J6 115 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 WDR64B1ANS9 1081 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 ZBTB43O43298 467 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 CTSAP10619 480 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 CCDC149Q6ZUS6 474 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 DDX53Q86TM3 631 aaKnown RBP15.1■□□□□ 0.01
COPS3-218ENST00000584216 ZNF598Q86UK7 904 aaKnown RBP15.1■□□□□ 0.01
COPS3-218ENST00000584216 ADSSL1Q8N142 457 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
COPS3-218ENST00000584216 NLRP7Q8WX94 980 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 LRRC2Q9BYS8 371 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 ZBP1Q9H171 429 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 SFXN1Q9H9B4 322 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 FBXL21Q9UKT6 434 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 MYO15AQ9UKN7 3530 aa15.1■□□□□ 0.01
COPS3-218ENST00000584216 ZC3H11AO75152 810 aaKnown RBP eCLIP15.09■□□□□ 0.01
COPS3-218ENST00000584216 OATP04181 439 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 AOC1P19801 751 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 GPC3P51654 580 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 TDGQ13569 410 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 CREB3L3Q68CJ9 461 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms