RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 TRMT13Q9NUP7 481 aaKnown RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 ZBTB39O15060 712 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 KINO60870 393 aaKnown RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 EFCAB14O75071 495 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 SSBP05455 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 KRT18P05783 430 aaKnown RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 CKBP12277 381 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 RAG1P15918 1043 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 THPOP40225 353 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 NAMPTP43490 491 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 NDUFA8P51970 172 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 ZNF131P52739 623 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 NCBP1Q09161 790 aaKnown RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 PSMD2Q13200 908 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 ALCAMQ13740 583 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 PLA2G4FQ68DD2 849 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 KRBA2Q6ZNG9 492 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 STXBP4Q6ZWJ1 553 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 KCNK18Q7Z418 384 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 GPBP1Q86WP2 473 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 CCDC65Q8IXS2 484 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 FMR1NBQ8N0W7 255 aaPredicted RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 PDILTQ8N807 584 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 CNNM3Q8NE01 707 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 PRPF31Q8WWY3 499 aaKnown RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 APBB2Q92870 758 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 DHX58Q96C10 678 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 CELF4Q9BZC1 486 aaKnown RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 GCOM2Q9BZD3 368 aaPredicted RBP10.32□□□□□ -0.76
UBBP4-201ENST00000583708 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 TRPV2Q9Y5S1 764 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 LOXHD1Q8IVV2 1947 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 DOCK5Q9H7D0 1870 aa10.32□□□□□ -0.76
UBBP4-201ENST00000583708 GPR182O15218 404 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 ACTN4O43707 911 aaKnown RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 GTPBP6O43824 516 aaPredicted RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 USO1O60763 962 aaKnown RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 TBCAO75347 108 aaKnown RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 SMC2O95347 1197 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 IQCF3P0C7M6 154 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 PLS3P13797 630 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 EIF4BP23588 611 aaKnown RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 PHKA2P46019 1235 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 PTENP60484 403 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 ZNF200P98182 395 aaPredicted RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 LAMTOR4Q0VGL1 99 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 DMP1Q13316 513 aaPredicted RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 SNW1Q13573 536 aaKnown RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 HIC1Q14526 733 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 MCM6Q14566 821 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 SKOR2Q2VWA4 1001 aaPredicted RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 ARSHQ5FYA8 562 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 FAM102BQ5T8I3 360 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 LRRC8DQ7L1W4 858 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 TRMT1LQ7Z2T5 733 aaKnown RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 TRAPPC12Q8WVT3 735 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 DNAJB3Q8WWF6 145 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 DDX12PQ92771 950 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 LBHD1Q9BQE6 289 aaPredicted RBP10.31□□□□□ -0.76
UBBP4-201ENST00000583708 FTHL17Q9BXU8 183 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 PANK2Q9BZ23 570 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 ST6GALNAC4Q9H4F1 302 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 XPNPEP1Q9NQW7 623 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 CHST12Q9NRB3 414 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 OLFML3Q9NRN5 406 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 LMBRD1Q9NUN5 540 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 TCHHQ07283 1943 aa10.31□□□□□ -0.76
UBBP4-201ENST00000583708 A0A087X0B3 334 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 FRMD3A2A2Y4 597 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 GPR32O75388 356 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 FAM13AO94988 1023 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 KIF20AO95235 890 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 CXCL10P02778 98 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 AXLP30530 894 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 MCM4P33991 863 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 GPC3P51654 580 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
UBBP4-201ENST00000583708 MGAT3Q09327 533 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 PPIGQ13427 754 aaKnown RBP eCLIP10.3□□□□□ -0.76
UBBP4-201ENST00000583708 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
UBBP4-201ENST00000583708 GIT2Q14161 759 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 HSP90AA2PQ14568 343 aaPredicted RBP10.3□□□□□ -0.76
UBBP4-201ENST00000583708 FAM187BQ17R55 369 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 LONRF3Q496Y0 759 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 ZNF618Q5T7W0 954 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 RUFY4Q6ZNE9 571 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 APBB1IPQ7Z5R6 666 aaPredicted RBP10.3□□□□□ -0.76
UBBP4-201ENST00000583708 ZBTB8OSQ8IWT0 167 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 LRRC71Q8N4P6 559 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 RSPH1Q8WYR4 309 aa10.3□□□□□ -0.76
UBBP4-201ENST00000583708 DHX38Q92620 1227 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms