RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SSX2IPQ9Y2D8 614 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 ZNF292O60281 2723 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 FNDC1Q4ZHG4 1894 aaPredicted RBP12.69□□□□□ -0.38
CASC3-208ENST00000583649 DMXL1Q9Y485 3027 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 HIP1O00291 1037 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 SKIP12755 728 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 ITGB5P18084 799 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 KIF5BP33176 963 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 ACTR2P61160 394 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 KIZQ2M2Z5 673 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 CKAP2LQ8IYA6 745 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 SLC44A3Q8N4M1 653 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 METTL13Q8N6R0 699 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 MAP7D2Q96T17 732 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 OSMRQ99650 979 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.38
CASC3-208ENST00000583649 UBIAD1Q9Y5Z9 338 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
CASC3-208ENST00000583649 NFASCO94856 1347 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 KMT2BQ9UMN6 2715 aaPredicted RBP12.67□□□□□ -0.38
CASC3-208ENST00000583649 DCDC2BA2VCK2 349 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 NCAM2O15394 837 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 NARSO43776 548 aaKnown RBP12.67□□□□□ -0.38
CASC3-208ENST00000583649 TBC1D4O60343 1298 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 ZC3H11AO75152 810 aaKnown RBP eCLIP12.67□□□□□ -0.38
CASC3-208ENST00000583649 RNASELQ05823 741 aaKnown RBP12.67□□□□□ -0.38
CASC3-208ENST00000583649 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 CMASQ8NFW8 434 aaPredicted RBP12.67□□□□□ -0.38
CASC3-208ENST00000583649 CTCFLQ8NI51 663 aaPredicted RBP12.67□□□□□ -0.38
CASC3-208ENST00000583649 TMEM40Q8WWA1 233 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 DSCC1Q9BVC3 393 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
CASC3-208ENST00000583649 DIAPH3Q9NSV4 1193 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 EPS15L1Q9UBC2 864 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
CASC3-208ENST00000583649 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 NT5C1B-RDH14C9J2C7 533 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 MEIS2O14770 477 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 IFIT3O14879 490 aaKnown RBP12.66□□□□□ -0.38
CASC3-208ENST00000583649 MAGEB2O15479 319 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 FOXD2O60548 495 aaPredicted RBP12.66□□□□□ -0.38
CASC3-208ENST00000583649 PDE1AP54750 535 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 DSC3Q14574 896 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 PPP2R5DQ14738 602 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 KANK3Q6NY19 840 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 GLB1LQ6UWU2 654 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 NETO1Q8TDF5 533 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 GPR152Q8TDT2 470 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 PHKBQ93100 1093 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 IGSF21Q96ID5 467 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 PCYT2Q99447 389 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 PIDD1Q9HB75 910 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 WDR6Q9NNW5 1121 aaKnown RBP12.66□□□□□ -0.38
CASC3-208ENST00000583649 SLC2A4RGQ9NR83 387 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 KCNH7Q9NS40 1196 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 ZSCAN32Q9NX65 697 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
CASC3-208ENST00000583649 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
CASC3-208ENST00000583649 ZFP37Q9Y6Q3 630 aaPredicted RBP12.66□□□□□ -0.38
CASC3-208ENST00000583649 TPRP12270 2363 aaKnown RBP12.65□□□□□ -0.38
CASC3-208ENST00000583649 CCDC195A0A1B0GUA6 201 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 CYTH3O43739 400 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 ADH1AP07327 375 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 SDSP20132 328 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 EIF4BP23588 611 aaKnown RBP12.65□□□□□ -0.38
CASC3-208ENST00000583649 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 GNAQP50148 359 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 CLCN4P51793 760 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 CSTF1Q05048 431 aaKnown RBP12.65□□□□□ -0.38
CASC3-208ENST00000583649 WTAPQ15007 396 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 SEC23AQ15436 765 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 PPM1JQ5JR12 505 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 MIS18BP1Q6P0N0 1132 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 PPP1R16BQ96T49 567 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
CASC3-208ENST00000583649 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 DLGAP2Q9P1A6 1054 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 AKT3Q9Y243 479 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 DOCK5Q9H7D0 1870 aa12.65□□□□□ -0.38
CASC3-208ENST00000583649 CLUHO75153 1309 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 CACNA1GO43497 2377 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 ACACBO00763 2458 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 KANSL1LA0AUZ9 987 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 VTNP04004 478 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 NRLP54845 237 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 STARD6P59095 220 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 PFKPQ01813 784 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 PRKCQQ04759 706 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms