RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MAEAQ7L5Y9 396 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TDHQ8IZJ6 230 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 DAW1Q8N136 415 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 DEFB123Q8N688 67 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SLC7A3Q8WY07 619 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 JPH2Q9BR39 696 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SETD4Q9NVD3 440 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RMND1Q9NWS8 449 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 HDAC6Q9UBN7 1215 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PHF24Q9UPV7 400 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SFI1A8K8P3 1242 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 DNM1LO00429 736 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RHOBTB3O94955 611 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 C22orf31O95567 290 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ARL2P36404 184 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ZNF131P52739 623 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ADAM17P78536 824 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 EHHADHQ08426 723 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MORC3Q14149 939 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 FAM102BQ5T8I3 360 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PPP1R13LQ8WUF5 828 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 COL4A3BPQ9Y5P4 624 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GRIN2DO15399 1336 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SCN10AQ9Y5Y9 1956 aa18.11■□□□□ 0.49
CDK5RAP3-228ENST00000583363 DNAH12Q6ZR08 3092 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 KAT6AQ92794 2004 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 KBTBD13C9JR72 458 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 BIN1O00499 593 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GAS2O43903 313 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TBCAO75347 108 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 FAM13AO94988 1023 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GAP43P17677 238 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 HOXC8P31273 242 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 NLRP12P59046 1061 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 COASYQ13057 564 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PSMD2Q13200 908 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MKRN4PQ13434 485 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 HIC1Q14526 733 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 LRRC26Q2I0M4 334 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 HERC4Q5GLZ8 1057 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 IER5Q5VY09 327 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ISM2Q6H9L7 571 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 EFCAB12Q6NXP0 572 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 NFRKBQ6P4R8 1299 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SESTD1Q86VW0 696 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 C7orf31Q8N865 590 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 LMBR1Q8WVP7 490 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 KIFAP3Q92845 792 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 VTI1AQ96AJ9 217 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 DRC1Q96MC2 740 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GLT1D1Q96MS3 346 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 FUCA2Q9BTY2 467 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PARVGQ9HBI0 331 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GPRC5CQ9NQ84 441 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PCDHA2Q9Y5H9 948 aa18.1■□□□□ 0.49
CDK5RAP3-228ENST00000583363 C17orf102A2RUQ5 167 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MBLAC1A4D2B0 266 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GNAT1P11488 350 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 BMP6P22004 513 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RTP1P59025 263 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ZNF445P59923 1031 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ITGA7Q13683 1181 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ZNF658Q5TYW1 1059 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MYCT1Q8N699 235 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 LINC01465Q8N7H1 131 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RETREG2Q8NC44 543 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TCP11Q8WWU5 503 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ZBTB10Q96DT7 871 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ZHX3Q9H4I2 956 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SUGCTQ9HAC7 445 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 EXOC1Q9NV70 894 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GTF2IRD1Q9UHL9 959 aa18.09■□□□□ 0.49
CDK5RAP3-228ENST00000583363 A0A1W2PQ45 241 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 A0A1W2PQY0 241 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PLS3P13797 630 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ZNF200P98182 395 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 PTPN11Q06124 597 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TYRO3Q06418 890 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 STK4Q13043 487 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 DRP2Q13474 957 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 LRRC71Q8N4P6 559 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 METTL13Q8N6R0 699 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SLC43A3Q8NBI5 491 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 HPS3Q969F9 1004 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 GTPBP4Q9BZE4 634 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 POLR3FQ9H1D9 316 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 C17orf75Q9HAS0 396 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MTMR10Q9NXD2 777 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 SEL1LQ9UBV2 794 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 KCNG1Q9UIX4 513 aa18.08■□□□□ 0.48
CDK5RAP3-228ENST00000583363 ARID2Q68CP9 1835 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 TREHO43280 583 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
CDK5RAP3-228ENST00000583363 MAPTP10636 758 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms