RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	PHF7	Q9BWX1	381 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	C6orf50	Q9HD87	102 aa		10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	GABBR1	Q9UBS5	961 aa		10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	TCEAL9	Q9UHQ7	104 aa		10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	CEP131	Q9UPN4	1083 aa		10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	PCDHA10	Q9Y5I2	948 aa		10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	WDFY4	Q6ZS81	3184 aa		10.81	□□□□□ -0.68
DDX42-215	ENST00000582985	TMEM221	A6NGB7	291 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985		M0R296	226 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	MAGEB2	O15479	319 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	CPA1	P15085	419 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	ATF7	P17544	494 aa	Predicted RBP	10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	GNA11	P29992	359 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	CIITA	P33076	1130 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	NLRP11	P59045	1033 aa	Known RBP	10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	ZXDA	P98168	799 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	PLCB3	Q01970	1234 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	PLPP4	Q5VZY2	271 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	EFCAB12	Q6NXP0	572 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	LRRC55	Q6ZSA7	311 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985		Q6ZUG5	572 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	BMP8A	Q7Z5Y6	402 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	LINC01465	Q8N7H1	131 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	RASGRP4	Q8TDF6	673 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	SUSD6	Q92537	303 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	MRPS27	Q92552	414 aa	Known RBP	10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	LENG9	Q96B70	501 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	RPGRIP1	Q96KN7	1286 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	FAM167A	Q96KS9	214 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	CASD1	Q96PB1	797 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	MAP7D2	Q96T17	732 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	TMEM117	Q9H0C3	514 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	ADAMTS10	Q9H324	1103 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	RNF19A	Q9NV58	838 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	AKT3	Q9Y243	479 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	LZTS1	Q9Y250	596 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	SAMM50	Q9Y512	469 aa		10.8	□□□□□ -0.68
DDX42-215	ENST00000582985	NID2	Q14112	1375 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	WDR64	B1ANS9	1081 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	HOXA2	O43364	376 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	PRPF3	O43395	683 aa	Known RBP	10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	ZNF862	O60290	1169 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	CDC45	O75419	566 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	SRGAP2B	P0DMP2	458 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	ZSCAN20	P17040	1043 aa	Predicted RBP	10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	EIF4B	P23588	611 aa	Known RBP	10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	TMOD1	P28289	359 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	KCNC3	Q14003	757 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	KCNT2	Q6UVM3	1135 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	TMEM184A	Q6ZMB5	413 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	LRRC43	Q8N309	656 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	LRRC71	Q8N4P6	559 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	BICD2	Q8TD16	824 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	KCNB2	Q92953	911 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	BRF1	Q92994	677 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	PHKB	Q93100	1093 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	PBXIP1	Q96AQ6	731 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	TCF25	Q9BQ70	676 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	S1PR5	Q9H228	398 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	ENTPD7	Q9NQZ7	604 aa		10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	PUF60	Q9UHX1	559 aa	Known RBP	10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	MYH9	P35579	1960 aa	Known RBP	10.79	□□□□□ -0.68
DDX42-215	ENST00000582985	HIDE1	A8MVS5	230 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	MSH4	O15457	936 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	EDIL3	O43854	480 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	OAT	P04181	439 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	PPM1A	P35813	382 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	PBX3	P40426	434 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	TEC	P42680	631 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	AKAP17A	Q02040	695 aa	Known RBP	10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	PRKCE	Q02156	737 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	ANKRD54	Q6NXT1	300 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	LLGL2	Q6P1M3	1020 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	ECHDC2	Q86YB7	292 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	ABI1	Q8IZP0	508 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	ZNF710	Q8N1W2	664 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	RNF169	Q8NCN4	708 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	PRSS33	Q8NF86	280 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	ZNF668	Q96K58	619 aa	Predicted RBP	10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	JAKMIP1	Q96N16	626 aa	Known RBP	10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	ZNF558	Q96NG5	402 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	NGRN	Q9NPE2	291 aa	Known RBP	10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	DISC1	Q9NRI5	854 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	NRBP2	Q9NSY0	501 aa		10.78	□□□□□ -0.68
DDX42-215	ENST00000582985	CHMP2A	O43633	222 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	GAS7	O60861	476 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	DARS	P14868	501 aa	Known RBP	10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	FGFR4	P22455	802 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	GPC3	P51654	580 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	KRT17	Q04695	432 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	SIGLEC14	Q08ET2	396 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	NTRK3	Q16288	839 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	UGCG	Q16739	394 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	CLLU1OS	Q5K130	101 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	SYCE2	Q6PIF2	218 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	BLOC1S2	Q6QNY1	142 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	TMC7	Q7Z402	723 aa		10.77	□□□□□ -0.69
DDX42-215	ENST00000582985	SUGP1	Q8IWZ8	645 aa	Known RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms