RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 CCDC149Q6ZUS6 474 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 OTOP3Q7RTS5 596 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 CABP7Q86V35 215 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 ECHDC2Q86YB7 292 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 CCDC60Q8IWA6 550 aaPredicted RBP17.23■□□□□ 0.35
IFT20-212ENST00000582797 VPS52Q8N1B4 723 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 RSAD2Q8WXG1 361 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 MXRA8Q9BRK3 442 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 COL1A2P08123 1366 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 USP24Q9UPU5 2620 aa17.23■□□□□ 0.35
IFT20-212ENST00000582797 IGKV6D-21A0A0A0MT36 114 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 DDX39AO00148 427 aaKnown RBP17.22■□□□□ 0.35
IFT20-212ENST00000582797 BACH1O14867 736 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 ATG7O95352 703 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 C22orf31O95567 290 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 CYP21A2P08686 494 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 SLC26A2P50443 739 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 ANTXR2P58335 489 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 RSPO4Q2I0M5 234 aaPredicted RBP17.22■□□□□ 0.35
IFT20-212ENST00000582797 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 GPR149Q86SP6 731 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 RUBCNQ92622 972 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 TMEM169Q96HH4 297 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 CA14Q9ULX7 337 aa17.22■□□□□ 0.35
IFT20-212ENST00000582797 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
IFT20-212ENST00000582797 PLEKHM2Q8IWE5 1019 aa17.21■□□□□ 0.35
IFT20-212ENST00000582797 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
IFT20-212ENST00000582797 METTL13Q8N6R0 699 aa17.21■□□□□ 0.35
IFT20-212ENST00000582797 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
IFT20-212ENST00000582797 BCL7CQ8WUZ0 217 aaPredicted RBP17.21■□□□□ 0.35
IFT20-212ENST00000582797 PGBD1Q96JS3 809 aa17.21■□□□□ 0.35
IFT20-212ENST00000582797 ZNF668Q96K58 619 aaPredicted RBP17.21■□□□□ 0.35
IFT20-212ENST00000582797 SFXN1Q9H9B4 322 aa17.21■□□□□ 0.35
IFT20-212ENST00000582797 AGO4Q9HCK5 861 aaKnown RBP17.21■□□□□ 0.35
IFT20-212ENST00000582797 PATJQ8NI35 1801 aa17.21■□□□□ 0.35
IFT20-212ENST00000582797 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 HIP1O00291 1037 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 N4BP1O75113 896 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 DCNP07585 359 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 SP9P0CG40 484 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 ATP4AP20648 1035 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 RFX1P22670 979 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 ALDH7A1P49419 539 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 HDAC1Q13547 482 aaPredicted RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 FAM160B1Q5W0V3 765 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 PDXDC2PQ6P474 469 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 ABHD15Q6UXT9 468 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 RALYLQ86SE5 291 aaKnown RBP17.2■□□□□ 0.34
IFT20-212ENST00000582797 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 TBC1D17Q9HA65 648 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 ZNF302Q9NR11 478 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 IRAK3Q9Y616 596 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 COL4A3Q01955 1670 aa17.2■□□□□ 0.34
IFT20-212ENST00000582797 E7EWF7 191 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 ZC3H11AO75152 810 aaKnown RBP eCLIP17.19■□□□□ 0.34
IFT20-212ENST00000582797 CTSAP10619 480 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 CLCN3P51790 818 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 NLRP11P59045 1033 aaKnown RBP17.19■□□□□ 0.34
IFT20-212ENST00000582797 LETM2Q2VYF4 491 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 ZNF598Q86UK7 904 aaKnown RBP17.19■□□□□ 0.34
IFT20-212ENST00000582797 IGDCC4Q8TDY8 1250 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 VN1R3Q9BXE9 311 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 IGSF9Q9P2J2 1179 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 WNT16Q9UBV4 365 aa17.19■□□□□ 0.34
IFT20-212ENST00000582797 MYH15Q9Y2K3 1946 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 RXRAP19793 462 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 FGFR4P22455 802 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 KIF5BP33176 963 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 TBC1D8BQ0IIM8 1120 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 SWSAP1Q6NVH7 229 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 ZC3H14Q6PJT7 736 aaKnown RBP17.18■□□□□ 0.34
IFT20-212ENST00000582797 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 MRPL9Q9BYD2 267 aaKnown RBP17.18■□□□□ 0.34
IFT20-212ENST00000582797 ADAMTS10Q9H324 1103 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 LY9Q9HBG7 655 aa17.18■□□□□ 0.34
IFT20-212ENST00000582797 A0A0U1RQF3 1178 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 POTEMA6NI47 508 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 DDAH1O94760 285 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
IFT20-212ENST00000582797 GIT2Q14161 759 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 PTPN14Q15678 1187 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 CEP55Q53EZ4 464 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 POTEGQ6S5H5 508 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 DDX53Q86TM3 631 aaKnown RBP17.17■□□□□ 0.34
IFT20-212ENST00000582797 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 SUMF1Q8NBK3 374 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 IGSF21Q96ID5 467 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 DLGAP2Q9P1A6 1054 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 AKT3Q9Y243 479 aa17.17■□□□□ 0.34
IFT20-212ENST00000582797 SSBP05455 408 aaKnown RBP eCLIP17.16■□□□□ 0.34
IFT20-212ENST00000582797 NEFLP07196 543 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms