RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FAM186BQ8IYM0 893 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 SYCP3Q8IZU3 236 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 ZNF784Q8NCA9 323 aaPredicted RBP24.82■■□□□ 1.56
CCDC47-204ENST00000582252 DNERQ8NFT8 737 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 UBXN4Q92575 508 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 CARD6Q9BX69 1037 aa24.82■■□□□ 1.56
CCDC47-204ENST00000582252 GTPBP10A4D1E9 387 aaKnown RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 K7ENM7 598 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 CNMDO75829 334 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 SLC25A27O95847 323 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 PLS3P13797 630 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 KIF5AQ12840 1032 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 DCAF17Q5H9S7 520 aaPredicted RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 TCERG1LQ5VWI1 586 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 OTUD6AQ7L8S5 288 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 ATP6V0A1Q93050 837 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 PARK7Q99497 189 aaKnown RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 STRA6Q9BX79 667 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 ARHGAP20Q9P2F6 1191 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 RBPJLQ9UBG7 517 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 PFASO15067 1338 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 AKR1B10O60218 316 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 PPP1R37O75864 691 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 LCA5LO95447 670 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 SERPING1P05155 500 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 CYP2C8P10632 490 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 KIF11P52732 1056 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 POLR2FP61218 127 aaKnown RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 KCNA1Q09470 495 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 EXOC3L4Q17RC7 722 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 GBP6Q6ZN66 633 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 SLC9A9Q8IVB4 645 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 DAW1Q8N136 415 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 PURBQ96QR8 312 aaKnown RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 ZCCHC17Q9NP64 241 aaKnown RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 NLRC4Q9NPP4 1024 aa24.81■■□□□ 1.56
CCDC47-204ENST00000582252 LUC7LQ9NQ29 371 aaKnown RBP24.81■■□□□ 1.56
CCDC47-204ENST00000582252 LCTP09848 1927 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 NOL4O94818 638 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 EIF4A3P38919 411 aaKnown RBP24.8■■□□□ 1.56
CCDC47-204ENST00000582252 GCLCP48506 637 aaPredicted RBP24.8■■□□□ 1.56
CCDC47-204ENST00000582252 SNRPFP62306 86 aaKnown RBP24.8■■□□□ 1.56
CCDC47-204ENST00000582252 CEP112Q8N8E3 955 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 ACCSQ96QU6 501 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 BCAS3Q9H6U6 928 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 AGPAT3Q9NRZ7 376 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 CDC23Q9UJX2 597 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 MYO6Q9UM54 1294 aa24.8■■□□□ 1.56
CCDC47-204ENST00000582252 WDR81Q562E7 1941 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 ZNFX1Q9P2E3 1918 aaKnown RBP24.79■■□□□ 1.56
CCDC47-204ENST00000582252 CCNE2O96020 404 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 PSAPP07602 524 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 INHBEP58166 350 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 TUBB4BP68371 445 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 ELF2Q15723 593 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 PTPN18Q99952 460 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 CRACR2AQ9BSW2 395 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 GANQ9H2C0 597 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 ST6GALNAC4Q9H4F1 302 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 TXNRD2Q9NNW7 524 aa24.79■■□□□ 1.56
CCDC47-204ENST00000582252 TADA3O75528 432 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 KCNA2P16389 499 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 CASP4P49662 377 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 NAA30Q147X3 362 aaPredicted RBP24.78■■□□□ 1.56
CCDC47-204ENST00000582252 PPP2R5AQ15172 486 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 TDRD12Q587J7 1177 aaKnown RBP24.78■■□□□ 1.56
CCDC47-204ENST00000582252 XKR9Q5GH70 373 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 IFIH1Q9BYX4 1025 aaKnown RBP24.78■■□□□ 1.56
CCDC47-204ENST00000582252 DMAC2Q9NW81 257 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.78■■□□□ 1.56
CCDC47-204ENST00000582252 FBXL5Q9UKA1 691 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 V9GYY5 206 aaPredicted RBP24.78■■□□□ 1.56
CCDC47-204ENST00000582252 ERVK-9P63128 1117 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 UGCGQ16739 394 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 NCAPG2Q86XI2 1143 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 TMEM174Q8WUU8 243 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 SLC35C1Q96A29 364 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 JPH1Q9HDC5 661 aaPredicted RBP24.78■■□□□ 1.56
CCDC47-204ENST00000582252 DAAM1Q9Y4D1 1078 aa24.78■■□□□ 1.56
CCDC47-204ENST00000582252 FAM155AB1AL88 458 aaPredicted RBP24.77■■□□□ 1.56
CCDC47-204ENST00000582252 PEX10O60683 326 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 STXBP2Q15833 593 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 ASIC2Q16515 512 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 MAEAQ7L5Y9 396 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 ANKRD35Q8N283 1001 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 HVCN1Q96D96 273 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 BORCS6Q96GS4 357 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 AIPL1Q9NZN9 384 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 SLC9A2Q9UBY0 812 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 PCDHA13Q9Y5I0 950 aa24.77■■□□□ 1.56
CCDC47-204ENST00000582252 SPATA31C2B4DYI2 1134 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 BACH1O14867 736 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 PLEKP08567 350 aaPredicted RBP24.76■■□□□ 1.55
CCDC47-204ENST00000582252 CCNA1P78396 465 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 RAPGEF1Q13905 1077 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 ERCC6LQ2NKX8 1250 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.76■■□□□ 1.55
CCDC47-204ENST00000582252 SHCBP1Q8NEM2 672 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 GPRC5AQ8NFJ5 357 aa24.76■■□□□ 1.55
CCDC47-204ENST00000582252 ARID2Q68CP9 1835 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms