RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 DBF4BQ8NFT6 615 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 KCNG4Q8TDN1 519 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 EVPLQ92817 2033 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 PPP6R2O75170 966 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 EYA4O95677 639 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 VTNP04004 478 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 SFPQP23246 707 aaKnown RBP eCLIP11.59□□□□□ -0.55
TOP3A-212ENST00000582122 ANP32AP39687 249 aaKnown RBP11.59□□□□□ -0.55
TOP3A-212ENST00000582122 NUCB2P80303 420 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 NCBP1Q09161 790 aaKnown RBP11.59□□□□□ -0.55
TOP3A-212ENST00000582122 GPNMBQ14956 572 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 PPP2R5AQ15172 486 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 STK38Q15208 465 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 KIZQ2M2Z5 673 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 SRGAP1Q7Z6B7 1085 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 RHPN2Q8IUC4 686 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
TOP3A-212ENST00000582122 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 PIGOQ8TEQ8 1089 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 RSPH1Q8WYR4 309 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 SEMA6BQ9H3T3 888 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 C1orf112Q9NSG2 853 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 DDX19AQ9NUU7 478 aaKnown RBP11.59□□□□□ -0.55
TOP3A-212ENST00000582122 CCDC39Q9UFE4 941 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 KIAA1024Q9UPX6 916 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 GINS2Q9Y248 185 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 COL4A3BPQ9Y5P4 624 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 PHLPP2Q6ZVD8 1323 aa11.59□□□□□ -0.55
TOP3A-212ENST00000582122 BRD1O95696 1058 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 STAG3L1P0CL83 205 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 DARSP14868 501 aaKnown RBP11.58□□□□□ -0.56
TOP3A-212ENST00000582122 ZSCAN20P17040 1043 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-212ENST00000582122 CYP11B2P19099 503 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 SCP2P22307 547 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 PHKA2P46019 1235 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 WDR5P61964 334 aaKnown RBP11.58□□□□□ -0.56
TOP3A-212ENST00000582122 TMEM62Q0P6H9 643 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 PTPAQ15257 358 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 IL17AQ16552 155 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 POTEGQ6S5H5 508 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 CABP7Q86V35 215 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
TOP3A-212ENST00000582122 SPRYD3Q8NCJ5 442 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 VWCEQ96DN2 955 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 NFKBIZQ9BYH8 718 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 ADAMTS10Q9H324 1103 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 C17orf75Q9HAS0 396 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 CHST12Q9NRB3 414 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 DACT1Q9NYF0 836 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 PADI3Q9ULW8 664 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 PCDHA11Q9Y5I1 949 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 CLIC4Q9Y696 253 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 LOXHD1Q8IVV2 1947 aa11.58□□□□□ -0.56
TOP3A-212ENST00000582122 TET1Q8NFU7 2136 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 TMEM150BA6NC51 233 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 SPTLC2O15270 562 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 SKIP12755 728 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 CD52P31358 61 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 LAMTOR4Q0VGL1 99 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 NFX1Q12986 1120 aaKnown RBP11.57□□□□□ -0.56
TOP3A-212ENST00000582122 PADI6Q6TGC4 694 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 LINC00301Q8NCQ3 95 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
TOP3A-212ENST00000582122 MYLIPQ8WY64 445 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 ZBTB10Q96DT7 871 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 IFT74Q96LB3 600 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 DRC1Q96MC2 740 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 USP28Q96RU2 1077 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 OSMRQ99650 979 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 PYM1Q9BRP8 204 aaKnown RBP11.57□□□□□ -0.56
TOP3A-212ENST00000582122 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 C2orf40Q9H1Z8 148 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-212ENST00000582122 BHMT2Q9H2M3 363 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 ERVK-5Q9HDB9 667 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 STK17AQ9UEE5 414 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 ST3GAL5Q9UNP4 418 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 EYSQ5T1H1 3165 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
TOP3A-212ENST00000582122 DENND3A2RUS2 1198 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 ZBTB39O15060 712 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 USO1O60763 962 aaKnown RBP11.56□□□□□ -0.56
TOP3A-212ENST00000582122 ABCD1P33897 745 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 ARL2P36404 184 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 KRT85P78386 507 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 CEBPZQ03701 1054 aaKnown RBP11.56□□□□□ -0.56
TOP3A-212ENST00000582122 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-212ENST00000582122 TMEM119Q4V9L6 283 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 CCDC73Q6ZRK6 1079 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 SLC24A5Q71RS6 500 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-212ENST00000582122 HERC6Q8IVU3 1022 aa11.56□□□□□ -0.56
TOP3A-212ENST00000582122 SYT2Q8N9I0 419 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-212ENST00000582122 PRUNE2Q8WUY3 3088 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms