RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CCZ1BP86790 482 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 CCZ1P86791 482 aaPredicted RBP10.21□□□□□ -0.77
SS18-220ENST00000582092 EHHADHQ08426 723 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 TRIM32Q13049 653 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 NEDD9Q14511 834 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 PTPN21Q16825 1174 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 FAM102BQ5T8I3 360 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 FAM160B1Q5W0V3 765 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 SWSAP1Q6NVH7 229 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 CYP26C1Q6V0L0 522 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 MAEAQ7L5Y9 396 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 TMTC1Q8IUR5 882 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 ARRDC4Q8NCT1 418 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 OR8K1Q8NGG5 319 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 SCFD1Q8WVM8 642 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 EEF2KMTQ96G04 330 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 MAML3Q96JK9 1138 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 NDST4Q9H3R1 872 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 MLXIPQ9HAP2 919 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 METTL14Q9HCE5 456 aaKnown RBP10.21□□□□□ -0.77
SS18-220ENST00000582092 OLFML3Q9NRN5 406 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 TYW1Q9NV66 732 aaKnown RBP10.21□□□□□ -0.77
SS18-220ENST00000582092 INTS13Q9NVM9 706 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 OGDHLQ9ULD0 1010 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 EXOC7Q9UPT5 735 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.21□□□□□ -0.77
SS18-220ENST00000582092 UBE4BO95155 1302 aa10.21□□□□□ -0.78
SS18-220ENST00000582092 MCM3APO60318 1980 aa10.21□□□□□ -0.78
SS18-220ENST00000582092 HTTP42858 3142 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 RSPH10B2B2RC85 870 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 K7ENM7 598 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 ZBTB39O15060 712 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 EVI5O60447 810 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 ATP9AO75110 1047 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 MFAP3LO75121 409 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 RSPH10BP0C881 870 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 MYBP10242 640 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 TGFB3P10600 412 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 NR2F2P24468 414 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 CCND3P30281 292 aaPredicted RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 CYP2C19P33261 490 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 KRT9P35527 623 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 CNTN2Q02246 1040 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 CEP135Q66GS9 1140 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 B3GNT9Q6UX72 402 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 APTXQ7Z2E3 356 aaKnown RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 CACNA2D4Q7Z3S7 1137 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 IRF2BP1Q8IU81 584 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 CCAR2Q8N163 923 aaKnown RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 NEK11Q8NG66 645 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 ZNF507Q8TCN5 953 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 PAWRQ96IZ0 340 aaKnown RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 CEP170P1Q96L14 293 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 IFT74Q96LB3 600 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 C16orf45Q96MC5 204 aaPredicted RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 ACCSQ96QU6 501 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 AZI2Q9H6S1 392 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 TMEM206Q9H813 350 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 MMRN2Q9H8L6 949 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 POLD4Q9HCU8 107 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 NRBP2Q9NSY0 501 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 ARMCX3Q9UH62 379 aaPredicted RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 DDX20Q9UHI6 824 aaKnown RBP10.2□□□□□ -0.78
SS18-220ENST00000582092 FRMD4BQ9Y2L6 1034 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 PCDHA2Q9Y5H9 948 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 CENPFP49454 3210 aa10.2□□□□□ -0.78
SS18-220ENST00000582092 ASB14A6NK59 587 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 CCDC169A6NNP5 214 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 H0YCG3 227 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 NOP56O00567 594 aaKnown RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 SEPT4O43236 478 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 SORBS3O60504 671 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 NR3C1P04150 777 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 CCDC175P0C221 793 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 MAPTP10636 758 aaKnown RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 CYBAP13498 195 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 KRT13P13646 458 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 NMT1P30419 496 aaKnown RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 ICAM3P32942 547 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 ABCD1P33897 745 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 PBX1P40424 430 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 ACTR2P61160 394 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 GOLGA8FQ08AF8 430 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 GOLGA8DPQ0D2H9 430 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 DMP1Q13316 513 aaPredicted RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 SYCP1Q15431 976 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 ZNF792Q3KQV3 632 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 UTP14CQ5TAP6 766 aaKnown RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 TCERG1LQ5VWI1 586 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
SS18-220ENST00000582092 CYFIP1Q7L576 1253 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 ZNF720Q7Z2F6 126 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 FRMD5Q7Z6J6 570 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 TC2NQ8N9U0 490 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 MCPH1Q8NEM0 835 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 KIFAP3Q92845 792 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms