RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 SLC26A2P50443 739 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 TRDNQ13061 729 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 TMEM173Q86WV6 379 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 RSAD2Q8WXG1 361 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 PCDHA6Q9UN73 950 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 PCDHA8Q9Y5H6 950 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 IRAK3Q9Y616 596 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 NFASCO94856 1347 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 COL1A2P08123 1366 aa14.34□□□□□ -0.11
CSNK1D-218ENST00000581655 USP24Q9UPU5 2620 aa14.33□□□□□ -0.11
CSNK1D-218ENST00000581655 BACH1O14867 736 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 GPR32O75388 356 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 ATG7O95352 703 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 CTSAP10619 480 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 GIT2Q14161 759 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 LETM2Q2VYF4 491 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 ZNF484Q5JVG2 852 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 C1orf210Q8IVY1 113 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 SUMF1Q8NBK3 374 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 BAHCC1Q9P281 2608 aa14.33□□□□□ -0.12
CSNK1D-218ENST00000581655 DOCK8Q8NF50 2099 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 ZBTB42B2RXF5 422 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 N4BP1O75113 896 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 ZC3H11AO75152 810 aaKnown RBP eCLIP14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 C22orf31O95567 290 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 POLGP54098 1239 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 ATXN1P54253 815 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 ST3GAL2Q16842 350 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 FAM160B1Q5W0V3 765 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 PDXDC2PQ6P474 469 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 PPFIBP1Q86W92 1011 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 CCDC60Q8IWA6 550 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 METTL13Q8N6R0 699 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 MRPL9Q9BYD2 267 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 DLGAP2Q9P1A6 1054 aa14.32□□□□□ -0.12
CSNK1D-218ENST00000581655 MYH9P35579 1960 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 POTEMA6NI47 508 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 DDX39AO00148 427 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 CCNE2O96020 404 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 GBP2P32456 591 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 SART3Q15020 963 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 NONOQ15233 471 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■□□ 18.9
CSNK1D-218ENST00000581655 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 ABHD15Q6UXT9 468 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 DDX53Q86TM3 631 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 ZNF598Q86UK7 904 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 SLC44A3Q8N4M1 653 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 BCL7CQ8WUZ0 217 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 IL25Q9H293 177 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 NCDNQ9UBB6 729 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 SIT1Q9Y3P8 196 aa14.31□□□□□ -0.12
CSNK1D-218ENST00000581655 A0A0U1RQF3 1178 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 HIP1O00291 1037 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 PLEKHA8P1O95397 391 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 SRFP11831 508 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 ATP4AP20648 1035 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 KIF5BP33176 963 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 CLCN3P51790 818 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 CLCN4P51793 760 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 PTPN14Q15678 1187 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 KIAA0319Q5VV43 1072 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 PHLDB3Q6NSJ2 640 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 C15orf39Q6ZRI6 1047 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 TRMT1LQ7Z2T5 733 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 RALYLQ86SE5 291 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 CKAP2LQ8IYA6 745 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 GPR152Q8TDT2 470 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 IGSF21Q96ID5 467 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 ZNF668Q96K58 619 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 AGO4Q9HCK5 861 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 ZNF302Q9NR11 478 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 AKT3Q9Y243 479 aa14.3□□□□□ -0.12
CSNK1D-218ENST00000581655 ATRXP46100 2492 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 GLULP15104 373 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 SDHBP21912 280 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 EIF4BP23588 611 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 KLRC2P26717 231 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 VARS2Q5ST30 1063 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 SWSAP1Q6NVH7 229 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 ZNF654Q8IZM8 581 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 PGBD1Q96JS3 809 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 KLHL5Q96PQ7 755 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 MAP3K14Q99558 947 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 FOXQ1Q9C009 403 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 ADAMTS10Q9H324 1103 aa14.29□□□□□ -0.12
CSNK1D-218ENST00000581655 NRDE2Q9H7Z3 1164 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms