RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 B3GNT9Q6UX72 402 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 KRT25Q7Z3Z0 450 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 RSPH3Q86UC2 560 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-211ENST00000581536 HAS1Q92839 578 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 ZNF668Q96K58 619 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-211ENST00000581536 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-211ENST00000581536 RIT2Q99578 217 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 TEKT3Q9BXF9 490 aa10.95□□□□□ -0.66
TOP3A-211ENST00000581536 CELF4Q9BZC1 486 aaKnown RBP10.95□□□□□ -0.66
TOP3A-211ENST00000581536 DDX25Q9UHL0 483 aaKnown RBP10.95□□□□□ -0.66
TOP3A-211ENST00000581536 VCANP13611 3396 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 WDR64B1ANS9 1081 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 EIF5BO60841 1220 aaKnown RBP10.94□□□□□ -0.66
TOP3A-211ENST00000581536 AMHP03971 560 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 VTNP04004 478 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 XBP1P17861 261 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 KRT2P35908 639 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 TMEM266Q2M3C6 531 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 IER5Q5VY09 327 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 NEK8Q86SG6 692 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 FAM177A1Q8N128 213 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-211ENST00000581536 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 LINC01599Q8WXQ3 324 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
TOP3A-211ENST00000581536 TMX1Q9H3N1 280 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 MTUS1Q9ULD2 1270 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 GINS2Q9Y248 185 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 TRPV2Q9Y5S1 764 aa10.94□□□□□ -0.66
TOP3A-211ENST00000581536 LINC01553A4QN01 128 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 LPXNO60711 386 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 EFCAB14O75071 495 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 C22orf31O95567 290 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 MMP1P03956 469 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 RBM25P49756 843 aaKnown RBP10.93□□□□□ -0.66
TOP3A-211ENST00000581536 CLCN3P51790 818 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 HTRA4P83105 476 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-211ENST00000581536 PPP4R3AQ6IN85 833 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 EFCAB12Q6NXP0 572 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 MOXD1Q6UVY6 613 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 NME8Q8N427 588 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 LRRC71Q8N4P6 559 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 BANK1Q8NDB2 785 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 WASF1Q92558 559 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 CEP89Q96ST8 783 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 KCNMB3Q9NPA1 279 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 NOC2LQ9Y3T9 749 aaKnown RBP10.93□□□□□ -0.66
TOP3A-211ENST00000581536 INSL6Q9Y581 213 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-211ENST00000581536 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
TOP3A-211ENST00000581536 COL1A2P08123 1366 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 MYO7AQ13402 2215 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 ATG2AQ2TAZ0 1938 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 IGSF9BQ9UPX0 1349 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 ZBTB39O15060 712 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 MGEA5O60502 916 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 GPR32O75388 356 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 CD2BP2O95400 341 aaKnown RBP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 ATP2B1P20020 1258 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 IBSPP21815 317 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 SFNP31947 248 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 PRKCEQ02156 737 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 NFX1Q12986 1120 aaKnown RBP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 GRB10Q13322 594 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 DRP2Q13474 957 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 KIZQ2M2Z5 673 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 TSHZ1Q6ZSZ6 1077 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 DIS3L2Q8IYB7 885 aaKnown RBP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 MICALL1Q8N3F8 863 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 APBB2Q92870 758 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 WRAP73Q9P2S5 460 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 VAV3Q9UKW4 847 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 MTCH2Q9Y6C9 303 aa10.92□□□□□ -0.66
TOP3A-211ENST00000581536 COL4A4P53420 1690 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-211ENST00000581536 A0A087WWV3 80 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 M0QZ92 97 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
TOP3A-211ENST00000581536 PRKCSHP14314 528 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-211ENST00000581536 JAK3P52333 1124 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 NLRP11P59045 1033 aaKnown RBP10.91□□□□□ -0.66
TOP3A-211ENST00000581536 ERVK-21P61565 698 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 TARBP2Q15633 366 aaKnown RBP10.91□□□□□ -0.66
TOP3A-211ENST00000581536 MTERF2Q49AM1 385 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 LINC01465Q8N7H1 131 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 GDPD5Q8WTR4 605 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 ZSCAN31Q96LW9 406 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-211ENST00000581536 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 OSMRQ99650 979 aa10.91□□□□□ -0.66
TOP3A-211ENST00000581536 NIFKQ9BYG3 293 aaKnown RBP10.91□□□□□ -0.66
TOP3A-211ENST00000581536 ERVK-5Q9HDB9 667 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms