RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ZSCAN16Q9H4T2 348 aaPredicted RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 SUCLA2Q9P2R7 463 aaPredicted RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 ST3GAL5Q9UNP4 418 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 INSL6Q9Y581 213 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 MICAL3Q7RTP6 2002 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 RBAK-RBAKDNI3L0D1 243 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 MYOGP15173 224 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 ARL2P36404 184 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 TAP1Q03518 808 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 PAK2Q13177 524 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 HAUS3Q68CZ6 603 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 HSCBQ8IWL3 235 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 PIGOQ8TEQ8 1089 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 PRPF31Q8WWY3 499 aaKnown RBP14.09□□□□□ -0.15
SNORD55-201ENST00000581525 OSMRQ99650 979 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 INO80BQ9C086 356 aaPredicted RBP14.09□□□□□ -0.15
SNORD55-201ENST00000581525 NKX2-4Q9H2Z4 354 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 IFT122Q9HBG6 1241 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 COL4A6Q14031 1691 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 PTPRSQ13332 1948 aa14.09□□□□□ -0.15
SNORD55-201ENST00000581525 C9IYK1 514 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 TLL1O43897 1013 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 MGEA5O60502 916 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
SNORD55-201ENST00000581525 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
SNORD55-201ENST00000581525 MXD4Q14582 209 aaPredicted RBP14.08□□□□□ -0.16
SNORD55-201ENST00000581525 EMC2Q15006 297 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 PTPAQ15257 358 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 FERMT3Q86UX7 667 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 AK8Q96MA6 479 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 NFKBIZQ9BYH8 718 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 GCOM2Q9BZD3 368 aaPredicted RBP14.08□□□□□ -0.16
SNORD55-201ENST00000581525 CHST12Q9NRB3 414 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 COL4A3BPQ9Y5P4 624 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 TTC3P53804 2025 aa14.08□□□□□ -0.16
SNORD55-201ENST00000581525 A0A087WZ62 844 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 ARHGEF15O94989 841 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 CA3P07451 260 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 LAMTOR4Q0VGL1 99 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 GRIN2CQ14957 1233 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 PCBP1Q15365 356 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 SF3A1Q15459 793 aaKnown RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 SRGAP1Q7Z6B7 1085 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 TMCO2Q7Z6W1 182 aaPredicted RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 MYOCDQ8IZQ8 938 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 PSPC1Q8WXF1 523 aaKnown RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 CDX2Q99626 313 aaPredicted RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 MTRQ99707 1265 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 FDXACB1Q9BRP7 624 aaPredicted RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 ELAC1Q9H777 363 aaKnown RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
SNORD55-201ENST00000581525 STXBP5LQ9Y2K9 1186 aa14.07□□□□□ -0.16
SNORD55-201ENST00000581525 A0A087WWV3 80 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 DGKIO75912 1065 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 LINC00271P0C7V0 271 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 CYP11B2P19099 503 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 LONP1P36776 959 aaKnown RBP14.06□□□□□ -0.16
SNORD55-201ENST00000581525 CCT6AP40227 531 aaKnown RBP14.06□□□□□ -0.16
SNORD55-201ENST00000581525 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
SNORD55-201ENST00000581525 PTENP60484 403 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 ERVK-21P61565 698 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 NFX1Q12986 1120 aaKnown RBP14.06□□□□□ -0.16
SNORD55-201ENST00000581525 KRT79Q5XKE5 535 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 RHPN2Q8IUC4 686 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 NPAS4Q8IUM7 802 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 KSR1Q8IVT5 923 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 ADAM2Q99965 735 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 CLIC4Q9Y696 253 aa14.06□□□□□ -0.16
SNORD55-201ENST00000581525 EYSQ5T1H1 3165 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 LCHNA4D1U4 455 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 LINC01553A4QN01 128 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 PP2D1A8MPX8 630 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 EYA4O95677 639 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 CDC25AP30304 524 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 SLC39A14Q15043 492 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 PPP2R2DQ66LE6 453 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 MCPH1Q8NEM0 835 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 SNX29Q8TEQ0 813 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 NLRP7Q8WX94 980 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 CLP1Q92989 425 aaKnown RBP14.05□□□□□ -0.16
SNORD55-201ENST00000581525 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 ZBED2Q9BTP6 218 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
SNORD55-201ENST00000581525 KIAA1024Q9UPX6 916 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 DNM3Q9UQ16 869 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 GINS2Q9Y248 185 aa14.05□□□□□ -0.16
SNORD55-201ENST00000581525 SRPRBQ9Y5M8 271 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms