RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 TCRBV5S4A2TA0A5A2 114 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 MYO1FO00160 1098 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 ORC4O43929 436 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SCG2P13521 617 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 PAMP19021 973 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 EIF4A3P38919 411 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 CASP2P42575 452 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 DNM2P50570 870 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 YWHAEP62258 255 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 GUCY1A3Q02108 690 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 B4GALNT4Q76KP1 1039 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 TTC13Q8NBP0 860 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SHCBP1Q8NEM2 672 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 HDAC7Q8WUI4 952 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 CSRNP1Q96S65 589 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 LACRTQ9GZZ8 138 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 THAP9Q9H5L6 903 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 KRT82Q9NSB4 513 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 NFU1Q9UMS0 254 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SPEF1Q9Y4P9 236 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 WNT7AO00755 349 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 EIF3HO15372 352 aaKnown RBP eCLIP4.57□□□□□ -1.68
RTTN-206ENST00000581161 PDE8AO60658 829 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 DKC1O60832 514 aaKnown RBP eCLIP4.57□□□□□ -1.68
RTTN-206ENST00000581161 NPY2RP49146 381 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 AP1S2P56377 157 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 LETM2Q2VYF4 491 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 DYMQ7RTS9 669 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 MAP7D3Q8IWC1 876 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 CCDC13Q8IYE1 715 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 RAB42Q8N4Z0 105 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 NUP58Q9BVL2 599 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 LRFN2Q9ULH4 789 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 RIPOR2Q9Y4F9 1068 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 PCDHA13Q9Y5I0 950 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 MROH5Q6ZUA9 1318 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 ANO9A1A5B4 782 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SMIM22K7EJ46 135 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 FTCDO95954 541 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 ATF7P17544 494 aaPredicted RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 MAN1A1P33908 653 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SMTNP53814 917 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 ZBED6P86452 979 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 PRKG1Q13976 671 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 HP1BP3Q5SSJ5 553 aaPredicted RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 RYBPQ8N488 228 aaPredicted RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 OGFOD1Q8N543 542 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 FBXL13Q8NEE6 735 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 HSPH1Q92598 858 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 VAT1LQ9HCJ6 419 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SLC39A2Q9NP94 309 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 UBN1Q9NPG3 1134 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 NLRC4Q9NPP4 1024 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SEPT3Q9UH03 358 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 PDE2AO00408 941 aaPredicted RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 PLEKP08567 350 aaPredicted RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 HSPA1AP0DMV8 641 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 HSPA1BP0DMV9 641 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 KRT4P19013 534 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 LMNB1P20700 586 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 AARSP49588 968 aaKnown RBP eCLIP4.57□□□□□ -1.68
RTTN-206ENST00000581161 PMS1P54277 932 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 ITKQ08881 620 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 SLC12A1Q13621 1099 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 PRPSAP1Q14558 356 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 GLE1Q53GS7 698 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 CABP7Q86V35 215 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 BLIDQ8IZY5 108 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 ELMOD1Q8N336 334 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 P2RX5Q93086 422 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 ARL8AQ96BM9 186 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 KRT12Q99456 494 aa4.57□□□□□ -1.68
RTTN-206ENST00000581161 PAIP2BQ9ULR5 123 aaKnown RBP4.57□□□□□ -1.68
RTTN-206ENST00000581161 POTEFA5A3E0 1075 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 GYG1P46976 350 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 MRPS15P82914 257 aaKnown RBP4.56□□□□□ -1.68
RTTN-206ENST00000581161 ATP2C1P98194 919 aaPredicted RBP4.56□□□□□ -1.68
RTTN-206ENST00000581161 PAK2Q13177 524 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 RBM26Q5T8P6 1007 aaKnown RBP4.56□□□□□ -1.68
RTTN-206ENST00000581161 LRRC8EQ6NSJ5 796 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 NUDT18Q6ZVK8 323 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 SH3RF1Q7Z6J0 888 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 ADSSL1Q8N142 457 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 GIPC2Q8TF65 315 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 FGD4Q96M96 766 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 MED10Q9BTT4 135 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 EPB41L5Q9HCM4 733 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 CAPN11Q9UMQ6 739 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 SPATA31A1Q5TZJ5 1347 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 MYH13Q9UKX3 1938 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 A0A1B0GUA9 196 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 CDC40O60508 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
RTTN-206ENST00000581161 HIP1RO75146 1068 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 RPS6KA5O75582 802 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 HNRNPH1P31943 449 aaKnown RBP4.56□□□□□ -1.68
RTTN-206ENST00000581161 IFT88Q13099 833 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 RAPGEF1Q13905 1077 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 ALX1Q15699 326 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 PDXDC2PQ6P474 469 aa4.56□□□□□ -1.68
RTTN-206ENST00000581161 TMTC3Q6ZXV5 915 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms