RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 FOSBP53539 338 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 NPEPPSP55786 919 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 FAM102BQ5T8I3 360 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 SLFN12Q8IYM2 578 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 HSD17B14Q9BPX1 270 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 LXNQ9BS40 222 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 PLVAPQ9BX97 442 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 CYP26B1Q9NR63 512 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 RGL1Q9NZL6 768 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 RWDD3Q9Y3V2 267 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 TRIP11Q15643 1979 aa11.88□□□□□ -0.51
SUPT4H1-204ENST00000580947 MYH11P35749 1972 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 DENND3A2RUS2 1198 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ZBTB39O15060 712 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 SLITRK3O94933 977 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 STAG3L1P0CL83 205 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ATF7P17544 494 aaPredicted RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 DNAJB1P25685 340 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 SKIV2LQ15477 1246 aaKnown RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ODR4Q5SWX8 454 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ADAMTS19Q8TE59 1207 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 P2RX5Q93086 422 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 HLA-CQ95604 372 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 DYDC2Q96IM9 177 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ZSCAN31Q96LW9 406 aaPredicted RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 C11orf84Q9BUA3 381 aaPredicted RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 TMEM60Q9H2L4 133 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 ELAC1Q9H777 363 aaKnown RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 TMEM161AQ9NX61 479 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 HCSTQ9UBK5 93 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 PLAGL2Q9UPG8 496 aa11.87□□□□□ -0.51
SUPT4H1-204ENST00000580947 A0A087WZ62 844 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 NEMFO60524 1076 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 CSDE1O75534 798 aaKnown RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 LYPLA2O95372 231 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 ITGB1P05556 798 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 FGFR1P11362 822 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 FGFR4P22455 802 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 YWHABP31946 246 aaKnown RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 TRIM29Q14134 588 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 CTTNQ14247 550 aaKnown RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 CALCRLQ16602 461 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 PTPROQ16827 1216 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 PAN2Q504Q3 1202 aaKnown RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 TIGD5Q53EQ6 642 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 TCEAL5Q5H9L2 206 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 NCAPH2Q6IBW4 605 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 KSR1Q8IVT5 923 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 FDXACB1Q9BRP7 624 aaPredicted RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 UBE2ZQ9H832 354 aaPredicted RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 PPME1Q9Y570 386 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 PCDHB7Q9Y5E2 793 aa11.86□□□□□ -0.51
SUPT4H1-204ENST00000580947 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 DKC1O60832 514 aaKnown RBP eCLIP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CYP4A11Q02928 519 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CTC1Q2NKJ3 1217 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 NAALADL2Q58DX5 795 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CLLU1OSQ5K130 101 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 LRRC55Q6ZSA7 311 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 ZNF410Q86VK4 478 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 ECHDC2Q86YB7 292 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 KLHL23Q8NBE8 558 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 SPPL3Q8TCT6 385 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 NEK9Q8TD19 979 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 C8orf76Q96K31 380 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CEP170P1Q96L14 293 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CASD1Q96PB1 797 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 EIF2AK1Q9BQI3 630 aaKnown RBP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 FOXP1Q9H334 677 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 NSUN3Q9H649 340 aaKnown RBP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 CWH43Q9H720 699 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 ZSWIM4Q9H7M6 989 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 ALG13Q9NP73 1137 aaKnown RBP11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 LRFN2Q9ULH4 789 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 PCDHA12Q9UN75 941 aa11.85□□□□□ -0.51
SUPT4H1-204ENST00000580947 POTEMA6NI47 508 aa11.84□□□□□ -0.51
SUPT4H1-204ENST00000580947 TBKBP1A7MCY6 615 aa11.84□□□□□ -0.51
SUPT4H1-204ENST00000580947 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-204ENST00000580947 SPATA31C1P0DKV0 1188 aa11.84□□□□□ -0.51
SUPT4H1-204ENST00000580947 LTBRP36941 435 aa11.84□□□□□ -0.51
SUPT4H1-204ENST00000580947 RFC5P40937 340 aa11.84□□□□□ -0.51
SUPT4H1-204ENST00000580947 DNM2P50570 870 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms