RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SCFD1Q8WVM8 642 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TRAPPC12Q8WVT3 735 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 P2RX5Q93086 422 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TMEM143Q96AN5 459 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 POLR3FQ9H1D9 316 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 NFE2L3Q9Y4A8 694 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYADML2A6NDP7 307 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PGK1P00558 417 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 F2P00734 622 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PEX3P56589 373 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 IGBP1P78318 339 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SPATA1Q5VX52 437 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 EPM2AIP1Q7L775 607 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ZNF720Q7Z2F6 126 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 NELFCDQ8IXH7 590 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 EXOC8Q8IYI6 725 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 FIZ1Q96SL8 496 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
CDK5RAP3-219ENST00000580670 BICDL2A1A5D9 508 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 K7ENM7 598 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PRPF6O94906 941 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PMS1P54277 932 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 RTP1P59025 263 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CHMP4BP1P59074 171 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PLCB2Q00722 1185 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DMP1Q13316 513 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GNASQ5JWF2 1037 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 STXBP4Q6ZWJ1 553 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 BSNDQ8WZ55 320 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 KAT2BQ92831 832 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 IFT74Q96LB3 600 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SEMA6BQ9H3T3 888 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 XPNPEP3Q9NQH7 507 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 FANCLQ9NW38 375 aa15.27■□□□□ 0.04
CDK5RAP3-219ENST00000580670 COL1A2P08123 1366 aa15.27■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CCDC169A6NNP5 214 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 EIF3DO15371 548 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KPNA6O60684 536 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MAPTP10636 758 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ARL2P36404 184 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SMTNP53814 917 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MFSD10Q14728 455 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZC2HC1CQ53FD0 456 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ANKRD40Q6AI12 368 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CENPPQ6IPU0 288 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TTI2Q6NXR4 508 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HSD3B7Q9H2F3 369 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 DDX20Q9UHI6 824 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CEP350Q5VT06 3117 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SLC16A4O15374 487 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 GAS2O43903 313 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZNF500O60304 480 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZEB2O60315 1214 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NPTX2P47972 431 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PSEN2P49810 448 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NKX3-2P78367 333 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PURAQ00577 322 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 GRIK4Q16099 956 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 BMT2Q1RMZ1 405 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 LRRC71Q8N4P6 559 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SLC17A8Q8NDX2 589 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZNF507Q8TCN5 953 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SPIRE2Q8WWL2 714 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TCP11Q8WWU5 503 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TSG101Q99816 390 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KMT5AQ9NQR1 393 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
CDK5RAP3-219ENST00000580670 UBE4BO95155 1302 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 IGKV6-21A0A0C4DH24 114 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MAGEB2O15479 319 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ADAMTS4O75173 837 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 C22orf31O95567 290 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SMIM10L2AP0DMW4 78 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SMIM10L2BP0DMW5 78 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KLRC1P26715 233 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HOXD13P35453 343 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NCKAP1LP55160 1127 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 DRP2Q13474 957 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ALCAMQ13740 583 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KNOP1Q1ED39 458 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HSP90AA4PQ58FG1 418 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 IER5Q5VY09 327 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HAUS6Q7Z4H7 955 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KSR1Q8IVT5 923 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 METTL13Q8N6R0 699 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 RETREG2Q8NC44 543 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ASAP3Q8TDY4 903 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZBTB10Q96DT7 871 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 DUSP9Q99956 384 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KATNAL1Q9BW62 490 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms