RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 IGSF9Q9P2J2 1179 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 NOC2LQ9Y3T9 749 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 PCDHA1Q9Y5I3 950 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 NEDD4P46934 1319 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 FIBPO43427 364 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 ATP9AO75110 1047 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 INSRRP14616 1297 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 HAND2P61296 217 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 SLC35G1Q2M3R5 365 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 GNPTABQ3T906 1256 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 ASPRV1Q53RT3 343 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 CCDC149Q6ZUS6 474 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 SLC24A5Q71RS6 500 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 OTOP3Q7RTS5 596 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 DGKHQ86XP1 1220 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 SAMD3Q8N6K7 520 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 GPR152Q8TDT2 470 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 TRAPPC12Q8WVT3 735 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 AUTS2Q8WXX7 1259 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 ZNF558Q96NG5 402 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 PCYT2Q99447 389 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 SENP7Q9BQF6 1050 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 FOXQ1Q9C009 403 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 C1orf112Q9NSG2 853 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 TMEM161AQ9NX61 479 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 ERAP1Q9NZ08 941 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 SPG21Q9NZD8 308 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 SIT1Q9Y3P8 196 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 PCDHA2Q9Y5H9 948 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 EVPLQ92817 2033 aa8.87□□□□□ -0.99
SMARCE1-217ENST00000580654 GCOM1H8Y6P7 765 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 M0QZ92 97 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 SPTLC1O15269 473 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 DHX16O60231 1041 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 LILRB5O75023 590 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 STAM2O75886 525 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 CXCL14O95715 111 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 RPLP2P05387 115 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 POLR2MP0CAP2 368 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 SRFP11831 508 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 KCNA2P16389 499 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 PPM1AP35813 382 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 KRT76Q01546 638 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 KRT17Q04695 432 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 DMWDQ09019 674 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 DSC3Q14574 896 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ZNF528Q3MIS6 628 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 SLC44A3Q8N4M1 653 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ZBTB44Q8NCP5 570 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 TMEM117Q9H0C3 514 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ZBP1Q9H171 429 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ELAC1Q9H777 363 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ATP6V0A4Q9HBG4 840 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ST3GAL5Q9UNP4 418 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 SMG5Q9UPR3 1016 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
SMARCE1-217ENST00000580654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 DENND3A2RUS2 1198 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 RRN3P2A6NIE6 340 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 SLC30A4O14863 429 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 ZBTB5O15062 677 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 RPS6KA5O75582 802 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 PARP1P09874 1014 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 RFX1P22670 979 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 PMLP29590 882 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 LETM2Q2VYF4 491 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 TMEM173Q86WV6 379 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 PJA1Q8NG27 643 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 OTUD7AQ8TE49 926 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 SEPT1Q8WYJ6 367 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 NELL1Q92832 810 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 ZNF775Q96BV0 537 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 BORCS6Q96GS4 357 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 EPC1Q9H2F5 836 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 SMARCAD1Q9H4L7 1026 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 SFXN1Q9H9B4 322 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 ARHGEF3Q9NR81 526 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 IRAK3Q9Y616 596 aa8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 BAZ2BQ9UIF8 2168 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-217ENST00000580654 ZMYM6O95789 1325 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 SMIM35A0A1B0GVV1 85 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 SOBPA7XYQ1 873 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 TRIM6-TRIM34B2RNG4 842 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 CA8P35219 290 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 METAP2P50579 478 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 STARD6P59095 220 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 WTAPQ15007 396 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 PLCB4Q15147 1175 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 CLLU1OSQ5K130 101 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 PPP1R15BQ5SWA1 713 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 MFSD6Q6ZSS7 791 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 CABP7Q86V35 215 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 FAM228AQ86W67 206 aa8.84□□□□□ -0.99
SMARCE1-217ENST00000580654 VPS52Q8N1B4 723 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms