RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 KLRC2P26717 231 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 FAM189BP81408 668 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 HTR4Q13639 388 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 CCDC6Q16204 474 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 KIZQ2M2Z5 673 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 IL31Q6EBC2 164 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 MIER1Q8N108 512 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 NELL1Q92832 810 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 OSMRQ99650 979 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 MAN1C1Q9NR34 630 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 RXFP3Q9NSD7 469 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 RAB23Q9ULC3 237 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 KDM3AQ9Y4C1 1321 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 TOP3BO95985 862 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 CTSAP10619 480 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 CLCN4P51793 760 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 SRSF5Q13243 272 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 DSC3Q14574 896 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 LONRF3Q496Y0 759 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 LAIR1Q6GTX8 287 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 SEPT1Q8WYJ6 367 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 TTC14Q96N46 770 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 KLHL5Q96PQ7 755 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 WDR6Q9NNW5 1121 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 SLC2A4RGQ9NR83 387 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 C2orf16Q68DN1 1984 aa16.2■□□□□ 0.18
CSNK1D-213ENST00000580446 CCDC195A0A1B0GUA6 201 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 RRN3P2A6NIE6 340 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 CNPP09543 421 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 SPATA31D3P0C874 917 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 KCNA2P16389 499 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 MLF2Q15773 248 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 SLC35G1Q2M3R5 365 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 ASPRV1Q53RT3 343 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 MTHFD1LQ6UB35 978 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 SPATA31D4Q6ZUB0 917 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 SMARCAD1Q9H4L7 1026 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 KAT14Q9H8E8 782 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 LOXHD1Q8IVV2 1947 aa16.19■□□□□ 0.18
CSNK1D-213ENST00000580446 FGAP02671 866 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 RETP07949 1114 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 LAMP2P13473 410 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 TARSP26639 723 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 ALDH7A1P49419 539 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 MTAPQ13126 283 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 BMS1Q14692 1282 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 SF3A2Q15428 464 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 ECHDC2Q86YB7 292 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 KDF1Q8NAX2 398 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 PIBF1Q8WXW3 757 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 FGF14Q92915 247 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 MAP4K1Q92918 833 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 SHDQ96IW2 340 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 ZNF668Q96K58 619 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 MYL10Q9BUA6 226 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 ELAC1Q9H777 363 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 LTB4R2Q9NPC1 389 aa16.18■□□□□ 0.18
CSNK1D-213ENST00000580446 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 PATJQ8NI35 1801 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 SMIM35A0A1B0GVV1 85 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 ANHXE9PGG2 379 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 C2CD2LO14523 706 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 GPR182O15218 404 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 INPPL1O15357 1258 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 FOXC1Q12948 553 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 CSRP2Q16527 193 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 SLC44A4Q53GD3 710 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 PARM1Q6UWI2 310 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 C15orf39Q6ZRI6 1047 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 KIAA0319LQ8IZA0 1049 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 SMG7Q92540 1137 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 PIGSQ96S52 555 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 DDX23Q9BUQ8 820 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 PRMT8Q9NR22 394 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 FRMPD4Q14CM0 1322 aa16.17■□□□□ 0.18
CSNK1D-213ENST00000580446 ZBTB5O15062 677 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 HOXA2O43364 376 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 B4GALT3O60512 393 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 VTNP04004 478 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 KLRC1P26715 233 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 AASDHQ4L235 1098 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 MFSD6Q6ZSS7 791 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 DDX53Q86TM3 631 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 STAMQ92783 540 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 IGSF21Q96ID5 467 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 SENP7Q9BQF6 1050 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 IRAK3Q9Y616 596 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
CSNK1D-213ENST00000580446 HELZ2Q9BYK8 2649 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 TAF4O00268 1085 aa16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 RPLP2P05387 115 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 TDGF1P13385 188 aa16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 FGFR4P22455 802 aa16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 PSAPL1Q6NUJ1 521 aa16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 TPRG1Q6ZUI0 275 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms