RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ANKFY1Q9P2R3 1169 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 HDAC6Q9UBN7 1215 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 STK39Q9UEW8 545 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CCPG1Q9ULG6 757 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 BARX2Q9UMQ3 279 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 DDX49Q9Y6V7 483 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 PLXNA4Q9HCM2 1894 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 PATJQ8NI35 1801 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 WDR19Q8NEZ3 1342 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 hCG_1642624A0A1W2PR95 340 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 CYTH3O43739 400 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PPFIA4O75335 1185 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 DGKIO75912 1065 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ITGB1P05556 798 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 SNHG28P0DPA3 235 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PCP11498 1178 aaKnown RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 PMLP29590 882 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 MCM5P33992 734 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 THPOP40225 353 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 LIMK1P53667 647 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ARHGAP1Q07960 439 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ZNF543Q08ER8 600 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 KCNC3Q14003 757 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 TOB2Q14106 344 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 GIT2Q14161 759 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 MBTPS1Q14703 1052 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RABEP1Q15276 862 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 NR6A1Q15406 480 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PPM1JQ5JR12 505 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 EGFLAMQ63HQ2 1017 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RSPO2Q6UXX9 243 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 DHX32Q7L7V1 743 aaKnown RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 OTOP3Q7RTS5 596 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 SAMD3Q8N6K7 520 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 KDF1Q8NAX2 398 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 KAT2BQ92831 832 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 TTC14Q96N46 770 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PURBQ96QR8 312 aaKnown RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 RHOBTB2Q9BYZ6 727 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 OSBPL6Q9BZF3 934 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 EPC1Q9H2F5 836 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 KAT14Q9H8E8 782 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 HOMER2Q9NSB8 354 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PUF60Q9UHX1 559 aaKnown RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 MAD2L2Q9UI95 211 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 FBXL21Q9UKT6 434 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PRR12Q9ULL5 1215 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ZFHX2Q9C0A1 2572 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 CDH23Q9H251 3354 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 CHD7Q9P2D1 2997 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RCCD1A6NED2 376 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PLEKHA8P1O95397 391 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 LARGE1O95461 756 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 NPR3P17342 541 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RPS6KB1P23443 525 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 CDC27P30260 824 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PPM1AP35813 382 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 TECP42680 631 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ZNF200P98182 395 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 TROAPQ12815 778 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 IKQ13123 557 aaPredicted RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 CAMK1Q14012 370 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 KIAA0753Q2KHM9 967 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 MUM1L1Q5H9M0 696 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RNF20Q5VTR2 975 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 CCDC62Q6P9F0 684 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ELMSAN1Q6PJG2 1045 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 NSMFQ6X4W1 530 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RNF207Q6ZRF8 634 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 CAPN12Q6ZSI9 719 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 EEPD1Q7L9B9 569 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 ZNF654Q8IZM8 581 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 FLCNQ8NFG4 579 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 DCAF4Q8WV16 495 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 TBC1D5Q92609 795 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 BRF1Q92994 677 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 SHDQ96IW2 340 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 RANBP17Q9H2T7 1088 aaKnown RBP3.87□□□□□ -1.79
CDH19-204ENST00000579658 ZSWIM6Q9HCJ5 1215 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 BOLA1Q9Y3E2 137 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 PKD1L2Q7Z442 2459 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 MYH6P13533 1939 aa3.87□□□□□ -1.79
CDH19-204ENST00000579658 NRCAMQ92823 1304 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 DNAH12Q6ZR08 3092 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 MIA3Q5JRA6 1907 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 TTC3P53804 2025 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 C2CD4DB7Z1M9 353 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 GOLGA6L22H0YM25 854 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 PPP1R11O60927 126 aaPredicted RBP3.86□□□□□ -1.79
CDH19-204ENST00000579658 UPP2O95045 317 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 BAG4O95429 457 aaKnown RBP3.86□□□□□ -1.79
CDH19-204ENST00000579658 EOMESO95936 686 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 LAG3P18627 525 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 GTF2F1P35269 517 aaKnown RBP eCLIP3.86□□□□□ -1.79
CDH19-204ENST00000579658 ZNF445P59923 1031 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 NUCB2P80303 420 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 PLCB3Q01970 1234 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 STK3Q13188 491 aa3.86□□□□□ -1.79
CDH19-204ENST00000579658 SEMA3FQ13275 785 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms