RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 CCDC6Q16204 474 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 LRRC43Q8N309 656 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
GGA3-206ENST00000578773 GLG1Q92896 1179 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 RXFP3Q9NSD7 469 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 C1orf112Q9NSG2 853 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 SEMA4GQ9NTN9 838 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 EPS15L1Q9UBC2 864 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 NUMBLQ9Y6R0 609 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 MYH9P35579 1960 aaKnown RBP12.79□□□□□ -0.36
GGA3-206ENST00000578773 COL4A2P08572 1712 aa12.79□□□□□ -0.36
GGA3-206ENST00000578773 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 SRRM3A6NNA2 597 aaPredicted RBP12.78□□□□□ -0.36
GGA3-206ENST00000578773 B4GALT3O60512 393 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 TDGF1P13385 188 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 KCNA2P16389 499 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 CLCN4P51793 760 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 BCAR1P56945 870 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 GPC5P78333 572 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 HELQQ8TDG4 1101 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 AMNQ9BXJ7 453 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 PCDHA2Q9Y5H9 948 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 CLUHO75153 1309 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
GGA3-206ENST00000578773 PDCD11Q14690 1871 aaKnown RBP12.77□□□□□ -0.37
GGA3-206ENST00000578773 FREM2Q5SZK8 3169 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 KANSL1LA0AUZ9 987 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 TBC1D4O60343 1298 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 RFPL2O75678 378 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 SSBP05455 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
GGA3-206ENST00000578773 CTSAP10619 480 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 SRSF5Q13243 272 aaKnown RBP12.77□□□□□ -0.37
GGA3-206ENST00000578773 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 OSMRQ99650 979 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
GGA3-206ENST00000578773 BCO2Q9BYV7 579 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 PRMT8Q9NR22 394 aaPredicted RBP12.77□□□□□ -0.37
GGA3-206ENST00000578773 SLC2A4RGQ9NR83 387 aa12.77□□□□□ -0.37
GGA3-206ENST00000578773 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 GCOM1H8Y6P7 765 aaPredicted RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 TM4SF5O14894 197 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 FGAP02671 866 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 POLR2MP0CAP2 368 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 TARSP26639 723 aaKnown RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 PRR23BQ6ZRT6 265 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 GET4Q7L5D6 327 aaPredicted RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 KDF1Q8NAX2 398 aaPredicted RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 FGF14Q92915 247 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 MTMR8Q96EF0 704 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 TTC14Q96N46 770 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 ELAC1Q9H777 363 aaKnown RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 WDR6Q9NNW5 1121 aaKnown RBP12.76□□□□□ -0.37
GGA3-206ENST00000578773 MAN1C1Q9NR34 630 aa12.76□□□□□ -0.37
GGA3-206ENST00000578773 CCDC195A0A1B0GUA6 201 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 SMIM35A0A1B0GVV1 85 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 SHISA7A6NL88 538 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 TAF4O00268 1085 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 CNPP09543 421 aaKnown RBP12.75□□□□□ -0.37
GGA3-206ENST00000578773 HOXC13P31276 330 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 FZD5Q13467 585 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 MLF2Q15773 248 aaPredicted RBP12.75□□□□□ -0.37
GGA3-206ENST00000578773 KIZQ2M2Z5 673 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 LAIR1Q6GTX8 287 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 TENM4Q6N022 2769 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 ECHDC2Q86YB7 292 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 KIAA0319LQ8IZA0 1049 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 MIER1Q8N108 512 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 ZNF707Q96C28 371 aaPredicted RBP12.75□□□□□ -0.37
GGA3-206ENST00000578773 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 LTB4R2Q9NPC1 389 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
GGA3-206ENST00000578773 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 INPPL1O15357 1258 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGA3-206ENST00000578773 HMMRO75330 724 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 SPATA31D3P0C874 917 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 LAMP2P13473 410 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 MTAPQ13126 283 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGA3-206ENST00000578773 SF3A2Q15428 464 aaKnown RBP12.74□□□□□ -0.37
GGA3-206ENST00000578773 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 PARM1Q6UWI2 310 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 C15orf39Q6ZRI6 1047 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 SPATA31D4Q6ZUB0 917 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 TMEM87AQ8NBN3 555 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms