RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-208	ENST00000578630	NLRP7	Q8WX94	980 aa		12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	TMEM143	Q96AN5	459 aa		12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	CLIC6	Q96NY7	704 aa		12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	IFIH1	Q9BYX4	1025 aa	Known RBP	12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	BHMT2	Q9H2M3	363 aa		12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-208	ENST00000578630	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630		E9PMD0	336 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	USO1	O60763	962 aa	Known RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	SRGAP2C	P0DJJ0	459 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	EIF4B	P23588	611 aa	Known RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	DDIT3	P35638	169 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	KCNJ6	P48051	423 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	ME1	P48163	572 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	GPC3	P51654	580 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	NFX1	Q12986	1120 aa	Known RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	GRB10	Q13322	594 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	TFDP1	Q14186	410 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	LPIN1	Q14693	890 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	SPECC1	Q5M775	1068 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	RRAGB	Q5VZM2	374 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	SYT2	Q8N9I0	419 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	PHOSPHO2	Q8TCD6	241 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	EPSTI1	Q96J88	318 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	PNMA5	Q96PV4	448 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	PPP1R16B	Q96T49	567 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	PLIN2	Q99541	437 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	OSMR	Q99650	979 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	FTHL17	Q9BXU8	183 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	ADAMTS10	Q9H324	1103 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	CDHR5	Q9HBB8	845 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	KCNG1	Q9UIX4	513 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	COL4A3BP	Q9Y5P4	624 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	SLC4A7	Q9Y6M7	1214 aa		12.81	□□□□□ -0.36
ERBB2-208	ENST00000578630	EVPL	Q92817	2033 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630		A0A087WZ62	844 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	SSB	P05455	408 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	PLA2G4B	P0C869	781 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	ARL2	P36404	184 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	LAMTOR4	Q0VGL1	99 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	PAK2	Q13177	524 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	DRP2	Q13474	957 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	KARS	Q15046	597 aa	Known RBP	12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	FAM102B	Q5T8I3	360 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	CCDC73	Q6ZRK6	1079 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	MAEA	Q7L5Y9	396 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	SYMPK	Q92797	1274 aa	Known RBP	12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	VWCE	Q96DN2	955 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	SPATA32	Q96LK8	384 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	NLRP4	Q96MN2	994 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	TIPIN	Q9BVW5	301 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	FAM13B	Q9NYF5	915 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	KCND2	Q9NZV8	630 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	PADI3	Q9ULW8	664 aa		12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	RBM19	Q9Y4C8	960 aa	Known RBP	12.8	□□□□□ -0.36
ERBB2-208	ENST00000578630	DARS	P14868	501 aa	Known RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	ZSCAN20	P17040	1043 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	CD52	P31358	61 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	POU5F1B	Q06416	359 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	NCBP1	Q09161	790 aa	Known RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	LRIT3	Q3SXY7	679 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	TMEM119	Q4V9L6	283 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	HABP4	Q5JVS0	413 aa	Known RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	RASIP1	Q5U651	963 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	RINT1	Q6NUQ1	792 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	SRGAP1	Q7Z6B7	1085 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	KSR1	Q8IVT5	923 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	RNF149	Q8NC42	400 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	KIFAP3	Q92845	792 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	ZNF668	Q96K58	619 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	IFT74	Q96LB3	600 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	AGO3	Q9H9G7	860 aa	Known RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	XPNPEP1	Q9NQW7	623 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	RNF216	Q9NWF9	866 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	PCDHA7	Q9UN72	937 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	ST3GAL5	Q9UNP4	418 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	NOC2L	Q9Y3T9	749 aa	Known RBP	12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	WDR81	Q562E7	1941 aa		12.79	□□□□□ -0.36
ERBB2-208	ENST00000578630	ENPP3	O14638	875 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	AMH	P03971	560 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	PLCG1	P19174	1290 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	SFPQ	P23246	707 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	PHKA2	P46019	1235 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	DHX8	Q14562	1220 aa	Known RBP	12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	PPP2R5A	Q15172	486 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	ADAL	Q6DHV7	355 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	C1orf186	Q6ZWK4	172 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	USP49	Q70CQ1	688 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	SV2B	Q7L1I2	683 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	KCNK18	Q7Z418	384 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	LEO1	Q8WVC0	666 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	RAD54L	Q92698	747 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	DRC1	Q96MC2	740 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	SLC9A7	Q96T83	725 aa		12.78	□□□□□ -0.36
ERBB2-208	ENST00000578630	PYM1	Q9BRP8	204 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms