RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HAUS6Q7Z4H7 955 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 FAM167AQ96KS9 214 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 SPAG5Q96R06 1193 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 MMP19Q99542 508 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 JPH2Q9BR39 696 aaPredicted RBP12.18□□□□□ -0.46
SKA2-204ENST00000578519 DESI2Q9BSY9 194 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 L2HGDHQ9H9P8 463 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 ZNF302Q9NR11 478 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 AGPAT3Q9NRZ7 376 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 AGPAT5Q9NUQ2 364 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
SKA2-204ENST00000578519 WRAP73Q9P2S5 460 aaPredicted RBP12.18□□□□□ -0.46
SKA2-204ENST00000578519 ASTN1O14525 1302 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 ZBTB39O15060 712 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 CLIC2O15247 247 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 TGFB1I1O43294 461 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 ATG7O95352 703 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 CCNE2O96020 404 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 RFC5P40937 340 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 GCLCP48506 637 aaPredicted RBP12.17□□□□□ -0.46
SKA2-204ENST00000578519 NCKAP1LP55160 1127 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 ENPEPQ07075 957 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 MAPK7Q13164 816 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 ASIC2Q16515 512 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 DCAF17Q5H9S7 520 aaPredicted RBP12.17□□□□□ -0.46
SKA2-204ENST00000578519 ZNF569Q5MCW4 686 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
SKA2-204ENST00000578519 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 CHP1Q99653 195 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
SKA2-204ENST00000578519 STRA6Q9BX79 667 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 AZI2Q9H6S1 392 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 LZTFL1Q9NQ48 299 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 BTBD7Q9P203 1132 aa12.17□□□□□ -0.46
SKA2-204ENST00000578519 GAS2O43903 313 aaKnown RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 PPP1R37O75864 691 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 AKAP3O75969 853 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 ERCC3P19447 782 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 EDNRBP24530 442 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 HOXD13P35453 343 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 PEX3P56589 373 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 POLR2FP61218 127 aaKnown RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 KCNMA1Q12791 1236 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 MTF1Q14872 753 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 ZC2HC1CQ53FD0 456 aaPredicted RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 CCDC122Q5T0U0 273 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 WDR59Q6PJI9 974 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 MAEAQ7L5Y9 396 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 C2orf69Q8N8R5 385 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 XXYLT1Q8NBI6 393 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 SEPT1Q8WYJ6 367 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 FIZ1Q96SL8 496 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 NAPGQ99747 312 aaPredicted RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 MLXIPQ9HAP2 919 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
SKA2-204ENST00000578519 SEPT9Q9UHD8 586 aaPredicted RBP12.16□□□□□ -0.46
SKA2-204ENST00000578519 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
SKA2-204ENST00000578519 STRNO43815 780 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 TACC1O75410 805 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 GFPT2O94808 682 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 OATP04181 439 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 STAT1P42224 750 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 MAGEA1P43355 309 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 KLK7P49862 253 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 SLC26A2P50443 739 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 CYP2J2P51589 502 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 VAV2P52735 878 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.46
SKA2-204ENST00000578519 PRKCEQ02156 737 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 KLHL30Q0D2K2 578 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 STRN3Q13033 797 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 IFI16Q16666 785 aaKnown RBP12.15□□□□□ -0.46
SKA2-204ENST00000578519 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
SKA2-204ENST00000578519 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 DAW1Q8N136 415 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 TCP11Q8WWU5 503 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 SLC7A3Q8WY07 619 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 CLMNQ96JQ2 1002 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 FAM81BQ96LP2 452 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 ALS2CR12Q96Q35 445 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 CYP26B1Q9NR63 512 aa12.15□□□□□ -0.46
SKA2-204ENST00000578519 IGSF9BQ9UPX0 1349 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 PMM2O15305 246 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms