RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 JPH2Q9BR39 696 aaPredicted RBP25.74■■□□□ 1.71
VAPA-205ENST00000578314 FOXP1Q9H334 677 aaPredicted RBP25.74■■□□□ 1.71
VAPA-205ENST00000578314 CYP26B1Q9NR63 512 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 LRFN2Q9ULH4 789 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 PCDHB7Q9Y5E2 793 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 EVPLQ92817 2033 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 NEMFO60524 1076 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 AAK1Q2M2I8 961 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 PLA2G4FQ68DD2 849 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 DYDC2Q96IM9 177 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 LXNQ9BS40 222 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 ZSWIM4Q9H7M6 989 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 RGL1Q9NZL6 768 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 COG5Q9UP83 839 aa25.73■■□□□ 1.71
VAPA-205ENST00000578314 SLITRK3O94933 977 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 CTNNB1P35222 781 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 NPEPPSP55786 919 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 PTPROQ16827 1216 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 EXOC8Q8IYI6 725 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 ZNF579Q8NAF0 562 aaKnown RBP25.72■■□□□ 1.71
VAPA-205ENST00000578314 NLRP7Q8WX94 980 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 ZNF668Q96K58 619 aaPredicted RBP25.72■■□□□ 1.71
VAPA-205ENST00000578314 CEP170P1Q96L14 293 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 HSD17B14Q9BPX1 270 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 TTC12Q9H892 705 aaPredicted RBP25.72■■□□□ 1.71
VAPA-205ENST00000578314 SUCLA2Q9P2R7 463 aaPredicted RBP25.72■■□□□ 1.71
VAPA-205ENST00000578314 WDR81Q562E7 1941 aa25.72■■□□□ 1.71
VAPA-205ENST00000578314 YWHABP31946 246 aaKnown RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 OTUD6AQ7L8S5 288 aa25.71■■□□□ 1.71
VAPA-205ENST00000578314 FAM184AQ8NB25 1140 aa25.71■■□□□ 1.71
VAPA-205ENST00000578314 UHRF1Q96T88 793 aaPredicted RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 C11orf84Q9BUA3 381 aaPredicted RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 PLVAPQ9BX97 442 aa25.71■■□□□ 1.71
VAPA-205ENST00000578314 GCOM2Q9BZD3 368 aaPredicted RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 DHX33Q9H6R0 707 aaKnown RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 ELAC1Q9H777 363 aaKnown RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 UPF2Q9HAU5 1272 aaKnown RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 MRPL42Q9Y6G3 142 aaKnown RBP25.71■■□□□ 1.71
VAPA-205ENST00000578314 ST18O60284 1047 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 LYPLA2O95372 231 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 BMP1P13497 986 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 RFC5P40937 340 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 TXKP42681 527 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 CTTNQ14247 550 aaKnown RBP25.7■■□□□ 1.7
VAPA-205ENST00000578314 ZNF410Q86VK4 478 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 SLC7A3Q8WY07 619 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 HLA-CQ95604 372 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 SCLT1Q96NL6 688 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 EIF2AK1Q9BQI3 630 aaKnown RBP25.7■■□□□ 1.7
VAPA-205ENST00000578314 TMEM161AQ9NX61 479 aa25.7■■□□□ 1.7
VAPA-205ENST00000578314 A0A087WZ62 844 aa25.69■■□□□ 1.7
VAPA-205ENST00000578314 ZSCAN20P17040 1043 aaPredicted RBP25.69■■□□□ 1.7
VAPA-205ENST00000578314 CYP4A11Q02928 519 aa25.69■■□□□ 1.7
VAPA-205ENST00000578314 FDXACB1Q9BRP7 624 aaPredicted RBP25.69■■□□□ 1.7
VAPA-205ENST00000578314 TMEM60Q9H2L4 133 aa25.69■■□□□ 1.7
VAPA-205ENST00000578314 ATP2B1P20020 1258 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 MCM7P33993 719 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 GATMP50440 423 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 KCNQ1P51787 676 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 ORC2Q13416 577 aaPredicted RBP25.68■■□□□ 1.7
VAPA-205ENST00000578314 PAN2Q504Q3 1202 aaKnown RBP25.68■■□□□ 1.7
VAPA-205ENST00000578314 NAALADL2Q58DX5 795 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 FAM102BQ5T8I3 360 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 RHPN2Q8IUC4 686 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 TPH2Q8IWU9 490 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 NEK9Q8TD19 979 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 P2RX5Q93086 422 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 LMAN2LQ9H0V9 348 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 ATP6V0A4Q9HBG4 840 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 LOXHD1Q8IVV2 1947 aa25.68■■□□□ 1.7
VAPA-205ENST00000578314 BDP1A6H8Y1 2624 aa25.67■■□□□ 1.7
VAPA-205ENST00000578314 ZBTB39O15060 712 aa25.67■■□□□ 1.7
VAPA-205ENST00000578314 IBSPP21815 317 aaPredicted RBP25.67■■□□□ 1.7
VAPA-205ENST00000578314 FGFR4P22455 802 aa25.67■■□□□ 1.7
VAPA-205ENST00000578314 TIGD5Q53EQ6 642 aa25.67■■□□□ 1.7
VAPA-205ENST00000578314 NOSTRINQ8IVI9 506 aa25.67■■□□□ 1.7
VAPA-205ENST00000578314 INO80BQ9C086 356 aaPredicted RBP25.67■■□□□ 1.7
VAPA-205ENST00000578314 CHST12Q9NRB3 414 aa25.67■■□□□ 1.7
VAPA-205ENST00000578314 TCF20Q9UGU0 1960 aaKnown RBP25.66■■□□□ 1.7
VAPA-205ENST00000578314 GRM6O15303 877 aa25.66■■□□□ 1.7
VAPA-205ENST00000578314 GAS2O43903 313 aaKnown RBP25.66■■□□□ 1.7
VAPA-205ENST00000578314 CSDE1O75534 798 aaKnown RBP25.66■■□□□ 1.7
VAPA-205ENST00000578314 TRAPPC10P48553 1259 aa25.66■■□□□ 1.7
VAPA-205ENST00000578314 POLGP54098 1239 aaPredicted RBP25.66■■□□□ 1.7
VAPA-205ENST00000578314 XKR9Q5GH70 373 aa25.66■■□□□ 1.7
VAPA-205ENST00000578314 KSR1Q8IVT5 923 aa25.66■■□□□ 1.7
VAPA-205ENST00000578314 PRPF31Q8WWY3 499 aaKnown RBP25.66■■□□□ 1.7
VAPA-205ENST00000578314 PLAGL2Q9UPG8 496 aa25.66■■□□□ 1.7
VAPA-205ENST00000578314 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.65■■□□□ 1.7
VAPA-205ENST00000578314 A0A0U1RQF3 1178 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 TBKBP1A7MCY6 615 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 U2AF2P26368 475 aaKnown RBP eCLIP25.65■■□□□ 1.73e-7■■■□□ 18.4
VAPA-205ENST00000578314 ZNF174Q15697 407 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 ECHDC2Q86YB7 292 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 TMEM143Q96AN5 459 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 TMX3Q96JJ7 454 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 TBC1D32Q96NH3 1257 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 IFT122Q9HBG6 1241 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 ANKEF1Q9NU02 776 aa25.65■■□□□ 1.7
VAPA-205ENST00000578314 COL4A3BPQ9Y5P4 624 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms