RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 GJA9P57773 515 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ERVK-21P61565 698 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 IL13RA1P78552 427 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 MEF2AQ02078 507 aaPredicted RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 SMAD4Q13485 552 aaKnown RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 BRDTQ58F21 947 aaPredicted RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 KANK2Q63ZY3 851 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 TMEM200BQ69YZ2 307 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 LILRA6Q6PI73 481 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 LMBR1LQ6UX01 489 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 TTLL10Q6ZVT0 673 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ZBTB46Q86UZ6 589 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 SIAH1Q8IUQ4 282 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 CARFQ8N187 725 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 STPG3Q8N7X2 389 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.38□□□□□ -1.87
COPS3-213ENST00000577210 LMBR1Q8WVP7 490 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 AUTS2Q8WXX7 1259 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 CHMP4CQ96CF2 233 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ZNF496Q96IT1 587 aaPredicted RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 CAMKK2Q96RR4 588 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 ORAI2Q96SN7 254 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 NOL10Q9BSC4 688 aaKnown RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 MYL10Q9BUA6 226 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 PITHD1Q9GZP4 211 aaPredicted RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 POFUT1Q9H488 388 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 MKS1Q9NXB0 559 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 SAP30BPQ9UHR5 308 aaKnown RBP3.38□□□□□ -1.87
COPS3-213ENST00000577210 PCDHB6Q9Y5E3 794 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 MYPNQ86TC9 1320 aa3.38□□□□□ -1.87
COPS3-213ENST00000577210 A0A0A6YYJ9 748 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 KLHL33A6NCF5 533 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 OPHN1O60890 802 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 SASH1O94885 1247 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 SNUPNO95149 360 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 RBP3P10745 1247 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 RECQLP46063 649 aaPredicted RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 KCNC1P48547 511 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 NEK2P51955 445 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 SLC16A1P53985 500 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 MANFP55145 182 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 MTMR1Q13613 665 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 MOGSQ13724 837 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 USP10Q14694 798 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 SSPNQ14714 243 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 MYBPC3Q14896 1274 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 EIF4HQ15056 248 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.37□□□□□ -1.87
COPS3-213ENST00000577210 PRR31Q5SQ13 230 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 ODR4Q5SWX8 454 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 FSTL4Q6MZW2 842 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 KLHDC10Q6PID8 442 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 Q6ZUG5 572 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 PNMA8AQ86V59 439 aaPredicted RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 RPUSD2Q8IZ73 545 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 RTKN2Q8IZC4 609 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 OR5AN1Q8NGI8 311 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 FATE1Q969F0 183 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 AJUBAQ96IF1 538 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 DYDC2Q96IM9 177 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 CCDC136Q96JN2 1154 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 ZSWIM3Q96MP5 696 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 YTHDC1Q96MU7 727 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 WDR92Q96MX6 357 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 AMNQ9BXJ7 453 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 KATNBL1Q9H079 304 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 IRF2BPLQ9H1B7 796 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 MTG2Q9H4K7 406 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 LUC7LQ9NQ29 371 aaKnown RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 JADE2Q9NQC1 790 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 TOPORSQ9NS56 1045 aaPredicted RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 POLR3BQ9NW08 1133 aaPredicted RBP3.37□□□□□ -1.87
COPS3-213ENST00000577210 C14orf119Q9NWQ9 140 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 TRHDEQ9UKU6 1024 aa3.37□□□□□ -1.87
COPS3-213ENST00000577210 PMS2P1A4D2B8 440 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 MROH6A6NGR9 719 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 DDX3XO00571 662 aaKnown RBP eCLIP3.36□□□□□ -1.871e-11■■■■■ 78.4
COPS3-213ENST00000577210 NRP1O14786 923 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 PHF2O75151 1096 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 KATNA1O75449 491 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 ALDH1L1O75891 902 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 IL18BPO95998 194 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 PFKMP08237 780 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 RGS3P49796 1198 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 SCAND1P57086 179 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 CD83Q01151 205 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 TOP3AQ13472 1001 aaPredicted RBP3.36□□□□□ -1.87
COPS3-213ENST00000577210 FAM50AQ14320 339 aaKnown RBP3.36□□□□□ -1.87
COPS3-213ENST00000577210 NOLC1Q14978 699 aaKnown RBP eCLIP3.36□□□□□ -1.87
COPS3-213ENST00000577210 VWA3BQ502W6 1294 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 ERICH6BQ5W0A0 696 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 PGM2L1Q6PCE3 622 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 RALYLQ86SE5 291 aaKnown RBP3.36□□□□□ -1.87
COPS3-213ENST00000577210 LGI4Q8N135 537 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 ADAMTS17Q8TE56 1095 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 GAB3Q8WWW8 586 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 NOX5Q96PH1 765 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 NUP88Q99567 741 aaPredicted RBP3.36□□□□□ -1.87
COPS3-213ENST00000577210 ANO3Q9BYT9 981 aa3.36□□□□□ -1.87
COPS3-213ENST00000577210 ASPSCR1Q9BZE9 553 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms