RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	PLPP7	Q8NBV4	271 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	IL31RA	Q8NI17	732 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	MTMR8	Q96EF0	704 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	MFSD1	Q9H3U5	465 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	KAT14	Q9H8E8	782 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	AGO3	Q9H9G7	860 aa	Known RBP	10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	TUBE1	Q9UJT0	475 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CDY2A	Q9Y6F7	541 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	FRYL	O94915	3013 aa		10.66	□□□□□ -0.7
TOM1L1-223	ENST00000576932	ACACB	O00763	2458 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CEP250	Q9BV73	2442 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	C2CD4D	B7Z1M9	353 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	ZBTB5	O15062	677 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	DHX16	O60231	1041 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	FGF18	O76093	207 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	LMNA	P02545	664 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	PARP1	P09874	1014 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	AOC1	P19801	751 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CD52	P31358	61 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	RAB15	P59190	212 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	ERVFC1	P60507	584 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	MRPS6	P82932	125 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	RBM10	P98175	930 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	PPFIA1	Q13136	1202 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	PAN2	Q504Q3	1202 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CES5A	Q6NT32	575 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CYFIP1	Q7L576	1253 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CCDC105	Q8IYK2	499 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	ZDHHC14	Q8IZN3	488 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	CASP10	Q92851	521 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	RTP3	Q9BQQ7	232 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	ADAM7	Q9H2U9	754 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	NGRN	Q9NPE2	291 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	PKD2L1	Q9P0L9	805 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	TFIP11	Q9UBB9	837 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	UST	Q9Y2C2	406 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	RBM19	Q9Y4C8	960 aa	Known RBP	10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	PCDHB11	Q9Y5F2	797 aa		10.65	□□□□□ -0.7
TOM1L1-223	ENST00000576932	IGSF9B	Q9UPX0	1349 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	KDM3A	Q9Y4C1	1321 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	GDF9	O60383	454 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	POLR2M	P0CAP2	368 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	HOXA13	P31271	388 aa	Predicted RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	SARS	P49591	514 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	MRPS9	P82933	396 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PLCB3	Q01970	1234 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PDE4C	Q08493	712 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	LAPTM4A	Q15012	233 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	ANGPT1	Q15389	498 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	GRIK4	Q16099	956 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	MCMDC2	Q4G0Z9	681 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	CWF19L1	Q69YN2	538 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PLEKHM2	Q8IWE5	1019 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	DNAJB3	Q8WWF6	145 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	MRPS27	Q92552	414 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	EVI5L	Q96CN4	794 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	BCAS3	Q9H6U6	928 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	DLL3	Q9NYJ7	618 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	ERAP1	Q9NZ08	941 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PUF60	Q9UHX1	559 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	LRFN2	Q9ULH4	789 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PADI3	Q9ULW8	664 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PCDHA1	Q9Y5I3	950 aa		10.64	□□□□□ -0.71
TOM1L1-223	ENST00000576932	OTOGL	Q3ZCN5	2332 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	ZFHX4	Q86UP3	3567 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	RRN3P2	A6NIE6	340 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932		M0QZ92	97 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PPP1R11	O60927	126 aa	Predicted RBP	10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PPFIA3	O75145	1194 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	LAG3	P18627	525 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	MTHFR	P42898	656 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PAK2	Q13177	524 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	INTS6L	Q5JSJ4	861 aa	Known RBP	10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	MARCH8	Q5T0T0	291 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	UTP14C	Q5TAP6	766 aa	Known RBP	10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	XRRA1	Q6P2D8	792 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	TBC1D10C	Q8IV04	446 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	THNSL1	Q8IYQ7	743 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	TDRD5	Q8NAT2	981 aa	Known RBP	10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	COLGALT1	Q8NBJ5	622 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	TNPO1	Q92973	898 aa	Known RBP	10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	ZKSCAN3	Q9BRR0	538 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	POMK	Q9H5K3	350 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	VAT1L	Q9HCJ6	419 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	C1orf112	Q9NSG2	853 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	TMEM260	Q9NX78	707 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PCDHB7	Q9Y5E2	793 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	TRPV2	Q9Y5S1	764 aa		10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.63	□□□□□ -0.71
TOM1L1-223	ENST00000576932	NEDD4	P46934	1319 aa		10.62	□□□□□ -0.71
TOM1L1-223	ENST00000576932	KRT37	O76014	449 aa		10.62	□□□□□ -0.71
TOM1L1-223	ENST00000576932	MX1	P20591	662 aa		10.62	□□□□□ -0.71
TOM1L1-223	ENST00000576932	SP100	P23497	879 aa	Predicted RBP	10.62	□□□□□ -0.71
TOM1L1-223	ENST00000576932	PPM1A	P35813	382 aa		10.62	□□□□□ -0.71
TOM1L1-223	ENST00000576932	TCF7	P36402	384 aa	Predicted RBP	10.62	□□□□□ -0.71
TOM1L1-223	ENST00000576932	ATP1A2	P50993	1020 aa		10.62	□□□□□ -0.71

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